RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 AMOTL1Q8IY63 956 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 GIMAP8Q8ND71 665 aaPredicted RBP14.2□□□□□ -0.14
CLIC4-202ENST00000488683 PLEKHA4Q9H4M7 779 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 SMARCAL1Q9NZC9 954 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 H7C1D1 291 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 EDIL3O43854 480 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 RHOBTB3O94955 611 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 IDEP14735 1019 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 AKR1B1P15121 316 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 TRIM21P19474 475 aaKnown RBP14.2□□□□□ -0.14
CLIC4-202ENST00000488683 KIAA0895Q8NCT3 520 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 ZNF507Q8TCN5 953 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 CNOT6LQ96LI5 555 aaKnown RBP14.2□□□□□ -0.14
CLIC4-202ENST00000488683 TRIM9Q9C026 710 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 ARFGAP3Q9NP61 516 aa14.2□□□□□ -0.14
CLIC4-202ENST00000488683 DDX4Q9NQI0 724 aaKnown RBP14.2□□□□□ -0.14
CLIC4-202ENST00000488683 OR52Z1P0C646 297 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 MTIF2P46199 727 aaKnown RBP14.19□□□□□ -0.14
CLIC4-202ENST00000488683 RHBDL3P58872 404 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 KCNB1Q14721 858 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 ECM1Q16610 540 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 RABGGTAQ92696 567 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 SPZ1Q9BXG8 430 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 PDE11AQ9HCR9 933 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 FAM207AQ9NSI2 230 aaPredicted RBP14.19□□□□□ -0.14
CLIC4-202ENST00000488683 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
CLIC4-202ENST00000488683 GPR75-ASB3A0A0A6YYF3 556 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 TNNI2P48788 182 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 TBC1D8BQ0IIM8 1120 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 CCDC122Q5T0U0 273 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
CLIC4-202ENST00000488683 KCTD1Q719H9 257 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 ANKRD13CQ8N6S4 541 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 ANKRD20A12PQ8NF67 263 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 NAPGQ99747 312 aaPredicted RBP14.19□□□□□ -0.14
CLIC4-202ENST00000488683 FGFBP2Q9BYJ0 223 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 SEMA6BQ9H3T3 888 aa14.19□□□□□ -0.14
CLIC4-202ENST00000488683 LGALS16A8MUM7 142 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 KIF20AO95235 890 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 NONOQ15233 471 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLIC4-202ENST00000488683 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 MMS19Q96T76 1030 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 EXOC1Q9NV70 894 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 EHD2Q9NZN4 543 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
CLIC4-202ENST00000488683 MYMKA6NI61 221 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 PSMA7O14818 248 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 SSBP05455 408 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLIC4-202ENST00000488683 LDHCP07864 332 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 PRPHP41219 470 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
CLIC4-202ENST00000488683 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.18□□□□□ -0.14
CLIC4-202ENST00000488683 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
CLIC4-202ENST00000488683 USP21Q9UK80 565 aa14.18□□□□□ -0.14
CLIC4-202ENST00000488683 NPHP3-ACAD11A0A0J9YXS1 232 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 DNA2P51530 1060 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 OR8K1Q8NGG5 319 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 RRP36Q96EU6 259 aaKnown RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 NOC4LQ9BVI4 516 aaKnown RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 MAGEC2Q9UBF1 373 aaPredicted RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 SEC63Q9UGP8 760 aaKnown RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 ZNF263O14978 683 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 PPP1R11O60927 126 aaPredicted RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 CXCR5P32302 372 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 TRIM14Q14142 442 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 MIIPQ5JXC2 388 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 SLC30A10Q6XR72 485 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 C15orf52Q6ZUT6 534 aaKnown RBP14.17□□□□□ -0.14
CLIC4-202ENST00000488683 NEK8Q86SG6 692 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 DNAAF5Q86Y56 855 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 ZFPM1Q8IX07 1006 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
CLIC4-202ENST00000488683 LAD1O00515 517 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 IL1R1P14778 569 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 GRB10Q13322 594 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 SKIDA1Q1XH10 827 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 KIAA1328Q86T90 577 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 P2RX5Q93086 422 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 UBXN6Q9BZV1 441 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 THAP9Q9H5L6 903 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 BLOC1S4Q9NUP1 217 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 MYH10P35580 1976 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 PDHBP11177 359 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 EEF1GP26641 437 aaKnown RBP14.16□□□□□ -0.14
CLIC4-202ENST00000488683 TCP10Q12799 353 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 KRT25Q7Z3Z0 450 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 TMC4Q7Z404 712 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
CLIC4-202ENST00000488683 PNMA5Q96PV4 448 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 DNAJC7Q99615 494 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 NHEJ1Q9H9Q4 299 aaPredicted RBP14.16□□□□□ -0.14
CLIC4-202ENST00000488683 MLXIPQ9HAP2 919 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms