RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PDGFCQ9NRA1 345 aa18.53■□□□□ 0.56
CTDSP1-209ENST00000488627 PCDHA1Q9Y5I3 950 aa18.53■□□□□ 0.56
CTDSP1-209ENST00000488627 NR2E3Q9Y5X4 410 aa18.53■□□□□ 0.56
CTDSP1-209ENST00000488627 SYNRGQ9UMZ2 1314 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 EPB41L2O43491 1005 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 RXRAP19793 462 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 KIF5BP33176 963 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 ADCYAP1R1P41586 468 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 NKX3-2P78367 333 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 EEPD1Q7L9B9 569 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 HOMER1Q86YM7 354 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 SRBD1Q8N5C6 995 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 SPZ1Q9BXG8 430 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 UPF3AQ9H1J1 476 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 PHF24Q9UPV7 400 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 GNEQ9Y223 722 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 SLC12A7Q9Y666 1083 aa18.52■□□□□ 0.56
CTDSP1-209ENST00000488627 PLXNA1Q9UIW2 1896 aa18.52■□□□□ 0.55
CTDSP1-209ENST00000488627 MYADML2A6NDP7 307 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 KBTBD13C9JR72 458 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 CTAGE5O15320 804 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 PLEKHA8P1O95397 391 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 MYCNP04198 464 aaPredicted RBP18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 TMEM63BQ5T3F8 832 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 RNF180Q86T96 592 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 FBXO16Q8IX29 292 aaPredicted RBP18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 LZTS2Q9BRK4 669 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 VTA1Q9NP79 307 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 BRPF3Q9ULD4 1205 aa18.51■□□□□ 0.55
CTDSP1-209ENST00000488627 HMGB1P09429 215 aaKnown RBP18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 CALM1P0DP23 149 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 CALM2P0DP24 149 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 CALM3P0DP25 149 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 CPA1P15085 419 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 SMPD1P17405 629 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 PTGS1P23219 599 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 CST5P28325 142 aaPredicted RBP18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 GNAQP50148 359 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 HSD17B4P51659 736 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 ATN1P54259 1190 aaPredicted RBP18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 GJA9P57773 515 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 TNFAIP2Q03169 654 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 IQSEC1Q6DN90 963 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 APOA5Q6Q788 366 aa18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 TSEN34Q9BSV6 310 aaKnown RBP18.5■□□□□ 0.55
CTDSP1-209ENST00000488627 RBM47A0AV96 593 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 SNX17Q15036 470 aa18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 SLC39A5Q6ZMH5 540 aa18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 C7orf61Q8IZ16 206 aa18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-209ENST00000488627 CFBP00751 764 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 TRAF1Q13077 416 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 KCNA10Q16322 511 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 MICU3Q86XE3 530 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 FBXL16Q8N461 479 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 NSUN6Q8TEA1 469 aaKnown RBP18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 FAM217BQ9NTX9 383 aaPredicted RBP18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 MAP3K20Q9NYL2 800 aaKnown RBP18.48■□□□□ 0.55
CTDSP1-209ENST00000488627 C6orf222P0C671 652 aaPredicted RBP18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 ACLYP53396 1101 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 PDE4DQ08499 809 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 FUT2Q10981 343 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 C1orf53Q5VUE5 145 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 RRP36Q96EU6 259 aaKnown RBP18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 RMDN3Q96TC7 470 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 PRO3102Q9H379 93 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 Q9Y3F1 56 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 CEP290O15078 2479 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 LCTP09848 1927 aa18.47■□□□□ 0.55
CTDSP1-209ENST00000488627 A0A1W2PQ45 241 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 A0A1W2PQY0 241 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 RPS6KB1P23443 525 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 HOXA13P31271 388 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 RTP1P59025 263 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 DUSP28Q4G0W2 176 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 GNASQ5JWF2 1037 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 SYNE3Q6ZMZ3 975 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 IWS1Q96ST2 819 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 AGXT2Q9BYV1 514 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 WDR11Q9BZH6 1224 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 COLQQ9Y215 455 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
CTDSP1-209ENST00000488627 MOXD2PA6NHM9 499 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 DYNC1LI2O43237 492 aaPredicted RBP18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 PSMA5P28066 241 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms