RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NASPP49321 788 aaPredicted RBP5.13□□□□□ -1.59
CD46-215ENST00000488596 ARID5AQ03989 594 aa5.13□□□□□ -1.59
CD46-215ENST00000488596 TARBP2Q15633 366 aaKnown RBP5.13□□□□□ -1.59
CD46-215ENST00000488596 ZYXQ15942 572 aaKnown RBP5.13□□□□□ -1.59
CD46-215ENST00000488596 NOL9Q5SY16 702 aaKnown RBP5.13□□□□□ -1.59
CD46-215ENST00000488596 ZNF526Q8TF50 670 aaPredicted RBP5.13□□□□□ -1.59
CD46-215ENST00000488596 SPATA25Q9BR10 227 aa5.13□□□□□ -1.59
CD46-215ENST00000488596 TANGO6Q9C0B7 1094 aa5.13□□□□□ -1.59
CD46-215ENST00000488596 FAM86C1Q9NVL1 165 aa5.13□□□□□ -1.59
CD46-215ENST00000488596 USP35Q9P2H5 1018 aa5.13□□□□□ -1.59
CD46-215ENST00000488596 ZNF451Q9Y4E5 1061 aa5.13□□□□□ -1.59
CD46-215ENST00000488596 A0A1W2PQJ5 194 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 SUV39H1O43463 412 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 IFNGR1P15260 489 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 CD247P20963 164 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 NOP2P46087 812 aaKnown RBP5.12□□□□□ -1.59
CD46-215ENST00000488596 HTRA3P83110 453 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 DLX2Q07687 328 aaPredicted RBP5.12□□□□□ -1.59
CD46-215ENST00000488596 ZFYVE27Q5T4F4 411 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 NT5DC1Q5TFE4 455 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 CYP2R1Q6VVX0 501 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 LIPIQ6XZB0 460 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 CCDC81Q6ZN84 652 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 FERMT3Q86UX7 667 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 FIBCD1Q8N539 461 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 NLGN2Q8NFZ4 835 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 PTCHD1Q96NR3 888 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 PPT2Q9UMR5 302 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 MYRFQ9Y2G1 1151 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 FHOD1Q9Y613 1164 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 PMF1-BGLAPU3KQ54 211 aa5.12□□□□□ -1.59
CD46-215ENST00000488596 IGSF3O75054 1194 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 ASGR2P07307 311 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 FBXW10Q5XX13 1052 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 RUFY4Q6ZNE9 571 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 SAPCD2Q86UD0 394 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 MCF2L2Q86YR7 1114 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 TAB3Q8N5C8 712 aaPredicted RBP5.11□□□□□ -1.59
CD46-215ENST00000488596 SREK1Q8WXA9 508 aaKnown RBP5.11□□□□□ -1.59
CD46-215ENST00000488596 SMARCC1Q92922 1105 aaPredicted RBP5.11□□□□□ -1.59
CD46-215ENST00000488596 SEC16BQ96JE7 1060 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 GMLQ99445 158 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.11□□□□□ -1.59
CD46-215ENST00000488596 NOL6Q9H6R4 1146 aaKnown RBP5.11□□□□□ -1.59
CD46-215ENST00000488596 BCAS3Q9H6U6 928 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 RXFP1Q9HBX9 757 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 MRVI1Q9Y6F6 885 aa5.11□□□□□ -1.59
CD46-215ENST00000488596 SH3D21A4FU49 640 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 TBC1D8O95759 1140 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 CD3EP07766 207 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 NCAM1P13591 858 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 INSRRP14616 1297 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 ATP2B1P20020 1258 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 GTF2F1P35269 517 aaKnown RBP eCLIP5.1□□□□□ -1.59
CD46-215ENST00000488596 SOX9P48436 509 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 CORO7P57737 925 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 HHIPL2Q6UWX4 724 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 CPLX3Q8WVH0 158 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 DRC1Q96MC2 740 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 TM9SF2Q99805 663 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 MCMBPQ9BTE3 642 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 RNF38Q9H0F5 515 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 USP40Q9NVE5 1235 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 FBLN5Q9UBX5 448 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 DUSP10Q9Y6W6 482 aa5.1□□□□□ -1.59
CD46-215ENST00000488596 CBFA2T2O43439 604 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 SSBP05455 408 aaKnown RBP eCLIP5.09□□□□□ -1.59
CD46-215ENST00000488596 FGRP09769 529 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 GLI4P10075 376 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 IMPDH2P12268 514 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 L1CAMP32004 1257 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 UBXN11Q5T124 520 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 SPATA32Q96LK8 384 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 FERD3LQ96RJ6 166 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 DBR1Q9UK59 544 aaKnown RBP5.09□□□□□ -1.59
CD46-215ENST00000488596 CNOT11Q9UKZ1 510 aaKnown RBP5.09□□□□□ -1.59
CD46-215ENST00000488596 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
CD46-215ENST00000488596 LTBP3Q9NS15 1303 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 NOBOXO60393 691 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 PPP1R11O60927 126 aaPredicted RBP5.08□□□□□ -1.6
CD46-215ENST00000488596 ITGA4P13612 1032 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 GUCY2CP25092 1073 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 PMLP29590 882 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 ETFBP38117 255 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 POU4F1Q01851 419 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 COL9A2Q14055 689 aaPredicted RBP5.08□□□□□ -1.6
CD46-215ENST00000488596 PPP2R5DQ14738 602 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 RBBP8NLQ8NC74 664 aaPredicted RBP5.08□□□□□ -1.6
CD46-215ENST00000488596 DDX1Q92499 740 aaKnown RBP5.08□□□□□ -1.6
CD46-215ENST00000488596 ALG3Q92685 438 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 ANAPC16Q96DE5 110 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 ZDHHC15Q96MV8 337 aa5.08□□□□□ -1.6
CD46-215ENST00000488596 ZNF214Q9UL59 606 aaPredicted RBP5.08□□□□□ -1.6
CD46-215ENST00000488596 SF3B6Q9Y3B4 125 aaKnown RBP5.08□□□□□ -1.6
CD46-215ENST00000488596 A0A087WZG4 1122 aa5.07□□□□□ -1.6
CD46-215ENST00000488596 K7ESM1 405 aa5.07□□□□□ -1.6
CD46-215ENST00000488596 PUM1Q14671 1186 aaKnown RBP eCLIP5.07□□□□□ -1.6
CD46-215ENST00000488596 SF3A1Q15459 793 aaKnown RBP5.07□□□□□ -1.6
CD46-215ENST00000488596 B3GNT8Q7Z7M8 397 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms