RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 HMGB1P09429 215 aaKnown RBP27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 CALM1P0DP23 149 aa27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 CALM2P0DP24 149 aa27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 CALM3P0DP25 149 aa27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 COL6A1P12109 1028 aa27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 FBXO16Q8IX29 292 aaPredicted RBP27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 TBC1D5Q92609 795 aa27.47■■□□□ 1.99
RHBDD3-205ENST00000488106 SYNRGQ9UMZ2 1314 aa27.46■■□□□ 1.99
RHBDD3-205ENST00000488106 FGD1P98174 961 aa27.46■■□□□ 1.99
RHBDD3-205ENST00000488106 LRRC41Q15345 812 aa27.46■■□□□ 1.99
RHBDD3-205ENST00000488106 CMTR1Q8N1G2 835 aaKnown RBP27.46■■□□□ 1.99
RHBDD3-205ENST00000488106 SENP6Q9GZR1 1112 aaPredicted RBP27.46■■□□□ 1.99
RHBDD3-205ENST00000488106 PCDHA1Q9Y5I3 950 aa27.46■■□□□ 1.99
RHBDD3-205ENST00000488106 EVI5O60447 810 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 APOA5Q6Q788 366 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 BLOC1S2Q6QNY1 142 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 SYNE3Q6ZMZ3 975 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 MCF2L2Q86YR7 1114 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 RGS22Q8NE09 1264 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 SPZ1Q9BXG8 430 aa27.45■■□□□ 1.98
RHBDD3-205ENST00000488106 PNMA6FA0A0J9YX94 578 aa27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 OPLAHO14841 1288 aa27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 CFBP00751 764 aa27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 GNAQP50148 359 aa27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 RRP36Q96EU6 259 aaKnown RBP27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 COL20A1Q9P218 1284 aa27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 BRPF3Q9ULD4 1205 aa27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 NAP1L2Q9ULW6 460 aaPredicted RBP27.44■■□□□ 1.98
RHBDD3-205ENST00000488106 DOCK5Q9H7D0 1870 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 CASTP20810 708 aaKnown RBP27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 ADCYAP1R1P41586 468 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 RNF180Q86T96 592 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 C7orf61Q8IZ16 206 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 SRBD1Q8N5C6 995 aaKnown RBP27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 DNERQ8NFT8 737 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 SYTL5Q8TDW5 730 aaPredicted RBP27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 MORC4Q8TE76 937 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 LZTS2Q9BRK4 669 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 USP26Q9BXU7 913 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 PDGFCQ9NRA1 345 aa27.43■■□□□ 1.98
RHBDD3-205ENST00000488106 KLF18A0A0U1RQI7 1052 aa27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 H0YGN5 161 aa27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 EPB41L2O43491 1005 aaKnown RBP27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 DUSP11O75319 330 aaKnown RBP27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 PDE4DQ08499 809 aa27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 Q6ZUG5 572 aa27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 NOL8Q76FK4 1167 aaKnown RBP27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 FANCBQ8NB91 859 aa27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 MPHOSPH6Q99547 160 aaKnown RBP27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 VTA1Q9NP79 307 aa27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 SEC63Q9UGP8 760 aaKnown RBP27.42■■□□□ 1.98
RHBDD3-205ENST00000488106 ZBTB43O43298 467 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 ADAMTS4O75173 837 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 ATN1P54259 1190 aaPredicted RBP27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 TNFAIP2Q03169 654 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 TRAF1Q13077 416 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 LRRC26Q2I0M4 334 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 TMTC3Q6ZXV5 915 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 CCDC82Q8N4S0 544 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 FERMT2Q96AC1 680 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 TAAR1Q96RJ0 339 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 NR2E3Q9Y5X4 410 aa27.41■■□□□ 1.98
RHBDD3-205ENST00000488106 LOC102724159A0A0B4J2E5 919 aa27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 MYADML2A6NDP7 307 aa27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 C6orf222P0C671 652 aaPredicted RBP27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 RPS6KB1P23443 525 aa27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 PSMA5P28066 241 aa27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 PWP2Q15269 919 aaKnown RBP27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 TAPT1Q6NXT6 567 aa27.4■■□□□ 1.98
RHBDD3-205ENST00000488106 hCG_1642624A0A1W2PR95 340 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 GOLGA8AA7E2F4 631 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 GOLGA8BA8MQT2 603 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 PTGS1P23219 599 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 SMARCA1P28370 1054 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 HOXA13P31271 388 aaPredicted RBP27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 HSD17B4P51659 736 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 IRX5P78411 483 aaPredicted RBP27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 APOBRQ0VD83 1088 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 RTN1Q16799 776 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 BRF1Q92994 677 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 RMDN3Q96TC7 470 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 MAF1Q9H063 256 aa27.39■■□□□ 1.98
RHBDD3-205ENST00000488106 EDNRBP24530 442 aa27.38■■□□□ 1.97
RHBDD3-205ENST00000488106 NSUN6Q8TEA1 469 aaKnown RBP27.38■■□□□ 1.97
RHBDD3-205ENST00000488106 SPC25Q9HBM1 224 aa27.38■■□□□ 1.97
RHBDD3-205ENST00000488106 RBM28Q9NW13 759 aaKnown RBP27.38■■□□□ 1.97
RHBDD3-205ENST00000488106 PHF24Q9UPV7 400 aa27.38■■□□□ 1.97
RHBDD3-205ENST00000488106 LTBP2Q14767 1821 aa27.38■■□□□ 1.97
RHBDD3-205ENST00000488106 TRIOBPQ9H2D6 2365 aa27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 B4DLN1 442 aa27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 SMPD1P17405 629 aa27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 EIF2AK2P19525 551 aaKnown RBP27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 MRPL12P52815 198 aaKnown RBP27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 ARHGEF16Q5VV41 709 aa27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 TLK2Q86UE8 772 aa27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 UPF3AQ9H1J1 476 aaKnown RBP27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 CNTNAP5Q8WYK1 1306 aa27.37■■□□□ 1.97
RHBDD3-205ENST00000488106 RANBP2P49792 3224 aaKnown RBP27.36■■□□□ 1.97
RHBDD3-205ENST00000488106 GHRHRQ02643 423 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms