RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SLC26A6Q9BXS9 759 aa19.84■□□□□ 0.77
SHROOM1-205ENST00000488072 UPF2Q9HAU5 1272 aaKnown RBP19.84■□□□□ 0.77
SHROOM1-205ENST00000488072 CFBP00751 764 aa19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 HMGCRP04035 888 aa19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 CCL5P13501 91 aa19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 PRKAR2AP13861 404 aaKnown RBP19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 RCAN1P53805 252 aa19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 SOX10P56693 466 aa19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 SYTL5Q8TDW5 730 aaPredicted RBP19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 SLKQ9H2G2 1235 aaPredicted RBP19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 MRPL11Q9Y3B7 192 aaKnown RBP19.83■□□□□ 0.77
SHROOM1-205ENST00000488072 POTEFA5A3E0 1075 aa19.82■□□□□ 0.76
SHROOM1-205ENST00000488072 SNAI1O95863 264 aaPredicted RBP19.82■□□□□ 0.76
SHROOM1-205ENST00000488072 TMEM63BQ5T3F8 832 aa19.82■□□□□ 0.76
SHROOM1-205ENST00000488072 ANO1Q5XXA6 986 aa19.82■□□□□ 0.76
SHROOM1-205ENST00000488072 SEC63Q9UGP8 760 aaKnown RBP19.82■□□□□ 0.76
SHROOM1-205ENST00000488072 ZNFX1Q9P2E3 1918 aaKnown RBP19.82■□□□□ 0.76
SHROOM1-205ENST00000488072 ZNF236Q9UL36 1845 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 LCTP09848 1927 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 STXBP3O00186 592 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 UBXN2AP68543 259 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 RABEP1Q15276 862 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 UBE2SQ16763 222 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 MAP3K21Q5TCX8 1036 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 USP17L6PQ6QN14 398 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 EEPD1Q7L9B9 569 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 LENG1Q96BZ8 264 aaPredicted RBP19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 TINF2Q9BSI4 451 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 GJB4Q9NTQ9 266 aa19.81■□□□□ 0.76
SHROOM1-205ENST00000488072 PRPF3O43395 683 aaKnown RBP19.8■□□□□ 0.76
SHROOM1-205ENST00000488072 JAK2O60674 1132 aa19.8■□□□□ 0.76
SHROOM1-205ENST00000488072 IFNAR1P17181 557 aa19.8■□□□□ 0.76
SHROOM1-205ENST00000488072 OLFML2BQ68BL8 750 aa19.8■□□□□ 0.76
SHROOM1-205ENST00000488072 FCHSD1Q86WN1 690 aa19.8■□□□□ 0.76
SHROOM1-205ENST00000488072 PFASO15067 1338 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 CCDC196A0A1B0GTZ2 297 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 ANKRD1Q15327 319 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 MFSD14CQ5VZR4 134 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 ARMCX2Q7L311 632 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 CCDC83Q8IWF9 413 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 IL31RAQ8NI17 732 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 GTF3C6Q969F1 213 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 PGBD1Q96JS3 809 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 RNF208Q9H0X6 261 aa19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 DIS3Q9Y2L1 958 aaKnown RBP19.79■□□□□ 0.76
SHROOM1-205ENST00000488072 MEIS2O14770 477 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 CYBAP13498 195 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 ALDH5A1P51649 535 aaPredicted RBP19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 HSD17B4P51659 736 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 FOSBP53539 338 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 IRX5P78411 483 aaPredicted RBP19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 PFKFB3Q16875 520 aaPredicted RBP19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 KATNBL1Q9H079 304 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 PDGFCQ9NRA1 345 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 TMEM260Q9NX78 707 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 VPS54Q9P1Q0 977 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 LIMCH1Q9UPQ0 1083 aa19.78■□□□□ 0.76
SHROOM1-205ENST00000488072 CPLX1O14810 134 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 ADCY6O43306 1168 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 ZNF865P0CJ78 1059 aaPredicted RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 SCG2P13521 617 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 FDPSP14324 419 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 EIF2AK2P19525 551 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 EN2P19622 333 aaPredicted RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 CNGA1P29973 690 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 NAPAP54920 295 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 SSRP1Q08945 709 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 PPP2R5BQ15173 497 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 MCF2L2Q86YR7 1114 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 FBXO16Q8IX29 292 aaPredicted RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 RGS22Q8NE09 1264 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 NSUN7Q8NE18 718 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 DEFB118Q96PH6 123 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 SLC5A4Q9NY91 659 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 PNMA2Q9UL42 364 aa19.77■□□□□ 0.76
SHROOM1-205ENST00000488072 MYH6P13533 1939 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 PLXNA1Q9UIW2 1896 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 GCOM1H8Y6P7 765 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 POLR2MP0CAP2 368 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 MAMDC4Q6UXC1 1216 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 RNF26Q9BY78 433 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 HMX1Q9NP08 348 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 BARHL2Q9NY43 387 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 ZHX1Q9UKY1 873 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 CENPFP49454 3210 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 RPTORQ8N122 1335 aa19.76■□□□□ 0.75
SHROOM1-205ENST00000488072 SMCO2A6NFE2 343 aa19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 GHRHRQ02643 423 aa19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 ZNF467Q7Z7K2 595 aaPredicted RBP19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 TRMT44Q8IYL2 757 aaKnown RBP19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 RASGRP4Q8TDF6 673 aa19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 RMDN3Q96TC7 470 aa19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 PSTPIP2Q9H939 334 aa19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 PAK6Q9NQU5 681 aaPredicted RBP19.75■□□□□ 0.75
SHROOM1-205ENST00000488072 ACVR2BQ13705 512 aa19.74■□□□□ 0.75
SHROOM1-205ENST00000488072 GJC2Q5T442 439 aaPredicted RBP19.74■□□□□ 0.75
SHROOM1-205ENST00000488072 LHX8Q68G74 356 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms