RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PHACTR2O75167 634 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
TRA2B-214ENST00000487615 USP49Q70CQ1 688 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 RIC8AQ9NPQ8 531 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 MYO1AQ9UBC5 1043 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 CDC23Q9UJX2 597 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 GCOM1H8Y6P7 765 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-214ENST00000487615 POLR2MP0CAP2 368 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 KLRK1P26718 216 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 ARMCX5Q6P1M9 558 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
TRA2B-214ENST00000487615 VPS18Q9P253 973 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 FKBP3Q00688 224 aaKnown RBP13.07□□□□□ -0.32
TRA2B-214ENST00000487615 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-214ENST00000487615 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 OPA1O60313 960 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 BMP3P12645 472 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 GABPB1Q06547 395 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-214ENST00000487615 BRD3Q15059 726 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 MAN2A1Q16706 1144 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 TAX1BP1Q86VP1 789 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.323e-7■■■■□ 23.8
TRA2B-214ENST00000487615 COL4A3BPQ9Y5P4 624 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 SP4Q02446 784 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 ADAM9Q13443 819 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 TBC1D16Q8TBP0 767 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 DPF2Q92785 391 aa13.07□□□□□ -0.32
TRA2B-214ENST00000487615 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 BACH1O14867 736 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 EXOC3O60645 756 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 FLOT1O75955 427 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 PRCPP42785 496 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 C8orf74Q6P047 294 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 NSMFQ6X4W1 530 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CTNNBL1Q8WYA6 563 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-214ENST00000487615 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 ZBTB9Q96C00 473 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
TRA2B-214ENST00000487615 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CRKP46108 304 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 SMTNP53814 917 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-214ENST00000487615 MAEAQ7L5Y9 396 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 PSMB7Q99436 277 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 MRC1P22897 1456 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 MYCLP12524 364 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CCZ1BP86790 482 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CCZ1P86791 482 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-214ENST00000487615 LRRC41Q15345 812 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-214ENST00000487615 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 ACRBPQ8NEB7 543 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 PICK1Q9NRD5 415 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 TSKSQ9UJT2 592 aa13.06□□□□□ -0.32
TRA2B-214ENST00000487615 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 ZBTB5O15062 677 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 HOXA7P31268 230 aaPredicted RBP13.05□□□□□ -0.32
TRA2B-214ENST00000487615 CACNB3P54284 484 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.321e-20■□□□□ 8.8
TRA2B-214ENST00000487615 TNFAIP1Q13829 316 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 SUGT1Q9Y2Z0 365 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 FLT1P17948 1338 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 PP2D1A8MPX8 630 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 ZBED6P86452 979 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 SEC23AQ15436 765 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 TMEM179Q6ZVK1 233 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 ADGRA1Q86SQ6 560 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 IFT81Q8WYA0 676 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 HPSEQ9Y251 543 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 CCDC169A6NNP5 214 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 ZBED4O75132 1171 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 CAPN2P17655 700 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 TNFAIP3P21580 790 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 GRIN1Q05586 938 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 PSMD2Q13200 908 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 SEPT2Q15019 361 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 MAP3K14Q99558 947 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
TRA2B-214ENST00000487615 RABGAP1Q9Y3P9 1069 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 DESP17661 470 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 MB21D1Q8N884 522 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 ANO3Q9BYT9 981 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 PCDHA6Q9UN73 950 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 PCDHA8Q9Y5H6 950 aa13.05□□□□□ -0.32
TRA2B-214ENST00000487615 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms