RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CNGA1P29973 690 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 OAZ1P54368 228 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 CDC37Q16543 378 aaPredicted RBP12.38□□□□□ -0.43
TOP3B-216ENST00000487485 SLC35G1Q2M3R5 365 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 C9orf50Q5SZB4 431 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 MFSD14CQ5VZR4 134 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 SNRNP48Q6IEG0 339 aaKnown RBP12.38□□□□□ -0.43
TOP3B-216ENST00000487485 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 MTMR8Q96EF0 704 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 PIGSQ96S52 555 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
TOP3B-216ENST00000487485 TEX13BQ9BXU2 312 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
TOP3B-216ENST00000487485 NID2Q14112 1375 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 ZBTB5O15062 677 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 SLC25A27O95847 323 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 ICAM1P05362 532 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 ERCC3P19447 782 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 RTP1P59025 263 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 ME3Q16798 604 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 QRICH1Q2TAL8 776 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 WDR78Q5VTH9 848 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 MAFAQ8NHW3 353 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-216ENST00000487485 NPLOC4Q8TAT6 608 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 SLKQ9H2G2 1235 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-216ENST00000487485 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
TOP3B-216ENST00000487485 CWC22Q9HCG8 908 aaKnown RBP12.37□□□□□ -0.43
TOP3B-216ENST00000487485 CCPG1Q9ULG6 757 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
TOP3B-216ENST00000487485 CDH23Q9H251 3354 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PFKFB2O60825 505 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 LARGE1O95461 756 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PTPREP23469 700 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 CYP2C19P33261 490 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 FUT2Q10981 343 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 SCRN1Q12765 414 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 MYLIPQ8WY64 445 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
TOP3B-216ENST00000487485 TTYH1Q9H313 450 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-216ENST00000487485 MROH8Q9H579 483 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PRDM6Q9NQX0 595 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PRKAG2Q9UGJ0 569 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 ATP11BQ9Y2G3 1177 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 FRMPD3Q5JV73 1810 aa12.36□□□□□ -0.43
TOP3B-216ENST00000487485 PNMA6FA0A0J9YX94 578 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 DNM1LO00429 736 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 MSCO60682 206 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 IGHA2P01877 340 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 HOXC6P09630 235 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 ALAS1P13196 640 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 COPB2P35606 906 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 NTRK3Q16288 839 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 USH1GQ495M9 461 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 FBXO11Q86XK2 927 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 BADQ92934 168 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-216ENST00000487485 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
TOP3B-216ENST00000487485 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-216ENST00000487485 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
TOP3B-216ENST00000487485 CPLX1O14810 134 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 STRNO43815 780 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 PPP1R11O60927 126 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-216ENST00000487485 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
TOP3B-216ENST00000487485 IFNAR1P17181 557 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 TAL1P17542 331 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-216ENST00000487485 MCM2P49736 904 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 GRB14Q14449 540 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 TKFCQ3LXA3 575 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 CPLX2Q6PUV4 134 aaKnown RBP12.34□□□□□ -0.43
TOP3B-216ENST00000487485 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 PHKBQ93100 1093 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 GTF3C6Q969F1 213 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 PRDM5Q9NQX1 630 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-216ENST00000487485 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 FBXO40Q9UH90 709 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 IVNS1ABPQ9Y6Y0 642 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 ABCB11O95342 1321 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
TOP3B-216ENST00000487485 LTBP2Q14767 1821 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms