RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 CYP39A1Q9NYL5 469 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
NME1-208ENST00000487481 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
NME1-208ENST00000487481 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 ALAS1P13196 640 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 MRE11P49959 708 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 FAM178BQ8IXR5 827 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 ZNF444Q8N0Y2 327 aaPredicted RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 GJD3Q8N144 294 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 GDPD5Q8WTR4 605 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
NME1-208ENST00000487481 STRBPQ96SI9 672 aaKnown RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 MTG1Q9BT17 334 aaPredicted RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 UBE2ZQ9H832 354 aaPredicted RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 GPHNQ9NQX3 736 aaPredicted RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
NME1-208ENST00000487481 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 MYL3P08590 195 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 KCNJ6P48051 423 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
NME1-208ENST00000487481 BFSP2Q13515 415 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 FAM47CQ5HY64 1035 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 NFRKBQ6P4R8 1299 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 GMCL1Q96IK5 515 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 SIP14410 1827 aa18.12■□□□□ 0.49
NME1-208ENST00000487481 TRIP12Q14669 1992 aaPredicted RBP18.11■□□□□ 0.49
NME1-208ENST00000487481 ALADP13716 330 aa18.11■□□□□ 0.49
NME1-208ENST00000487481 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
NME1-208ENST00000487481 NBPF20Q3BBV1 942 aa18.11■□□□□ 0.49
NME1-208ENST00000487481 LEXMQ3ZCV2 418 aa18.11■□□□□ 0.49
NME1-208ENST00000487481 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
NME1-208ENST00000487481 WDR11Q9BZH6 1224 aa18.11■□□□□ 0.49
NME1-208ENST00000487481 WDFY4Q6ZS81 3184 aa18.11■□□□□ 0.49
NME1-208ENST00000487481 RAD50Q92878 1312 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.1■□□□□ 0.49
NME1-208ENST00000487481 LOC102724159A0A0B4J2E5 919 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 LCHNA4D1U4 455 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 PLA2G6O60733 806 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 SLC1A4P43007 532 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 PTPN11Q06124 597 aaPredicted RBP18.1■□□□□ 0.49
NME1-208ENST00000487481 PWP2Q15269 919 aaKnown RBP18.1■□□□□ 0.49
NME1-208ENST00000487481 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
NME1-208ENST00000487481 MUM1L1Q5H9M0 696 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 OR6J1Q8NGC5 347 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 KCNH6Q9H252 994 aa18.1■□□□□ 0.49
NME1-208ENST00000487481 HMMRO75330 724 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 PRDM1O75626 825 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 SSTR3P32745 418 aaPredicted RBP18.09■□□□□ 0.49
NME1-208ENST00000487481 WDR5P61964 334 aaKnown RBP18.09■□□□□ 0.49
NME1-208ENST00000487481 NHLH1Q02575 133 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 NSMFQ6X4W1 530 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 UIMC1Q96RL1 719 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 ADD3Q9UEY8 706 aaKnown RBP18.09■□□□□ 0.49
NME1-208ENST00000487481 NOD1Q9Y239 953 aa18.09■□□□□ 0.49
NME1-208ENST00000487481 RBM47A0AV96 593 aaKnown RBP18.08■□□□□ 0.48
NME1-208ENST00000487481 KPNA6O60684 536 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 TSPY3P0CV98 308 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 TSPY8P0CW00 308 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 KCNA5P22460 613 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 TDO2P48775 406 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 CCDC155Q8N6L0 562 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 NEDD1Q8NHV4 660 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.08■□□□□ 0.48
NME1-208ENST00000487481 CAGE1Q8TC20 777 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 TGS1Q96RS0 853 aaKnown RBP18.08■□□□□ 0.48
NME1-208ENST00000487481 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 SUGCTQ9HAC7 445 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 EPB41L4AQ9HCS5 686 aaPredicted RBP18.08■□□□□ 0.48
NME1-208ENST00000487481 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
NME1-208ENST00000487481 NKRFO15226 690 aaKnown RBP eCLIP18.07■□□□□ 0.48
NME1-208ENST00000487481 ALDH5A1P51649 535 aaPredicted RBP18.07■□□□□ 0.48
NME1-208ENST00000487481 ERVK-21P61565 698 aa18.07■□□□□ 0.48
NME1-208ENST00000487481 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
NME1-208ENST00000487481 SNX27Q96L92 541 aa18.07■□□□□ 0.48
NME1-208ENST00000487481 PURBQ96QR8 312 aaKnown RBP18.07■□□□□ 0.48
NME1-208ENST00000487481 ZNF318Q5VUA4 2279 aa18.07■□□□□ 0.48
NME1-208ENST00000487481 IL9P15248 144 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 GNAT2P19087 354 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 MCCP23508 829 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 PPP2R5BQ15173 497 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 PUS10Q3MIT2 529 aaKnown RBP18.06■□□□□ 0.48
NME1-208ENST00000487481 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 PTCRAQ6ISU1 281 aaPredicted RBP18.06■□□□□ 0.48
NME1-208ENST00000487481 APPBP2Q92624 585 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 RAD9AQ99638 391 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
NME1-208ENST00000487481 A6NJR5 290 aa18.05■□□□□ 0.48
NME1-208ENST00000487481 DCXO43602 365 aa18.05■□□□□ 0.48
NME1-208ENST00000487481 GJB5O95377 273 aa18.05■□□□□ 0.48
NME1-208ENST00000487481 PARNO95453 639 aaKnown RBP18.05■□□□□ 0.48
NME1-208ENST00000487481 ICAM1P05362 532 aa18.05■□□□□ 0.48
NME1-208ENST00000487481 SNAP25P60880 206 aa18.05■□□□□ 0.48
NME1-208ENST00000487481 DEFB103AP81534 67 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms