RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-204	ENST00000487452	GHRHR	Q02643	423 aa		32.32	■■■□□ 2.76
PPP1R35-204	ENST00000487452	MLLT1	Q03111	559 aa	Predicted RBP	32.32	■■■□□ 2.76
PPP1R35-204	ENST00000487452		V9GY48	417 aa	Predicted RBP	32.32	■■■□□ 2.76
PPP1R35-204	ENST00000487452	GJB1	P08034	283 aa		32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	SLC30A10	Q6XR72	485 aa		32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	FGD4	Q96M96	766 aa		32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	MPHOSPH6	Q99547	160 aa	Known RBP	32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	PAK6	Q9NQU5	681 aa	Predicted RBP	32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CNPY2	Q9Y2B0	182 aa		32.31	■■■□□ 2.76
PPP1R35-204	ENST00000487452	MYH6	P13533	1939 aa		32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	SOWAHB	A6NEL2	793 aa		32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	hCG_1984214	I3L0E3	225 aa		32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CENPF	P49454	3210 aa		32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CCT2	P78371	535 aa	Known RBP	32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CPLX2	Q6PUV4	134 aa	Known RBP	32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	ZNF713	Q8N859	430 aa	Predicted RBP	32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	DNER	Q8NFT8	737 aa		32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452	KIF2C	Q99661	725 aa		32.3	■■■□□ 2.76
PPP1R35-204	ENST00000487452		B4DLN1	442 aa		32.29	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CPLX1	O14810	134 aa		32.29	■■■□□ 2.76
PPP1R35-204	ENST00000487452	IFNAR1	P17181	557 aa		32.29	■■■□□ 2.76
PPP1R35-204	ENST00000487452	MRPL12	P52815	198 aa	Known RBP	32.29	■■■□□ 2.76
PPP1R35-204	ENST00000487452	LARP6	Q9BRS8	491 aa	Known RBP	32.29	■■■□□ 2.76
PPP1R35-204	ENST00000487452	SLK	Q9H2G2	1235 aa	Predicted RBP	32.29	■■■□□ 2.76
PPP1R35-204	ENST00000487452	OPLAH	O14841	1288 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CFB	P00751	764 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	CYBA	P13498	195 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	HSD17B4	P51659	736 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	AKAP17A	Q02040	695 aa	Known RBP	32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	RABEP1	Q15276	862 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	SYTL5	Q8TDW5	730 aa	Predicted RBP	32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	TBC1D32	Q96NH3	1257 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	TPCN1	Q9ULQ1	816 aa		32.28	■■■□□ 2.76
PPP1R35-204	ENST00000487452	KIAA0100	Q14667	2235 aa	Known RBP	32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	hCG_1642624	A0A1W2PR95	340 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	GCOM1	H8Y6P7	765 aa	Predicted RBP	32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	PRPF3	O43395	683 aa	Known RBP	32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	POLR2M	P0CAP2	368 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	NTRK3	Q16288	839 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	ARMCX2	Q7L311	632 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	TBC1D5	Q92609	795 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	ABHD16B	Q9H3Z7	469 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	NCOA5	Q9HCD5	579 aa	Known RBP	32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	PLXNA1	Q9UIW2	1896 aa		32.27	■■■□□ 2.76
PPP1R35-204	ENST00000487452	MSC	O60682	206 aa		32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PFKFB2	O60825	505 aa		32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	STK3	Q13188	491 aa		32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	HEATR3	Q7Z4Q2	680 aa		32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	TEX2	Q8IWB9	1127 aa		32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	RNF26	Q9BY78	433 aa	Predicted RBP	32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	32.26	■■■□□ 2.75
PPP1R35-204	ENST00000487452	POTEF	A5A3E0	1075 aa		32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SNAI1	O95863	264 aa	Predicted RBP	32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CCND3	P30281	292 aa	Predicted RBP	32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	GJA8	P48165	433 aa		32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	ALDH5A1	P51649	535 aa	Predicted RBP	32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	TRIM22	Q8IYM9	498 aa		32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	MORC4	Q8TE76	937 aa		32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	DEFB118	Q96PH6	123 aa		32.25	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CDKL5	O76039	1030 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SGPL1	O95470	568 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CNGA1	P29973	690 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PFKFB3	Q16875	520 aa	Predicted RBP	32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PPP1R18	Q6NYC8	613 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	TRPV1	Q8NER1	839 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	NSUN6	Q8TEA1	469 aa	Known RBP	32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	U2AF1L4	Q8WU68	220 aa	Known RBP	32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CUL5	Q93034	780 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PURB	Q96QR8	312 aa	Known RBP	32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	ASTN1	O14525	1302 aa		32.24	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SEPT4	O43236	478 aa		32.23	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PSTPIP2	Q9H939	334 aa		32.23	■■■□□ 2.75
PPP1R35-204	ENST00000487452	BARHL2	Q9NY43	387 aa		32.23	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SCG2	P13521	617 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SCRN1	Q12765	414 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	ACVR2B	Q13705	512 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PRAMEF19	Q5SWL8	479 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	WWC2	Q6AWC2	1192 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PHKB	Q93100	1093 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	IWS1	Q96ST2	819 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	RMDN3	Q96TC7	470 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SLC26A6	Q9BXS9	759 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	DDX20	Q9UHI6	824 aa	Known RBP	32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	LIMCH1	Q9UPQ0	1083 aa		32.22	■■■□□ 2.75
PPP1R35-204	ENST00000487452	PIK3CD	O00329	1044 aa		32.21	■■■□□ 2.75
PPP1R35-204	ENST00000487452	ZNF865	P0CJ78	1059 aa	Predicted RBP	32.21	■■■□□ 2.75
PPP1R35-204	ENST00000487452	SSRP1	Q08945	709 aa	Known RBP	32.21	■■■□□ 2.75
PPP1R35-204	ENST00000487452	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	32.21	■■■□□ 2.75
PPP1R35-204	ENST00000487452	TAAR1	Q96RJ0	339 aa		32.21	■■■□□ 2.75
PPP1R35-204	ENST00000487452	GLT8D2	Q9H1C3	349 aa		32.21	■■■□□ 2.75
PPP1R35-204	ENST00000487452	ST18	O60284	1047 aa		32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	EDNRB	P24530	442 aa		32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	NAPA	P54920	295 aa		32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	NOL8	Q76FK4	1167 aa	Known RBP	32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CCDC12	Q8WUD4	166 aa	Predicted RBP	32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	CRISPLD2	Q9H0B8	497 aa		32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	COL20A1	Q9P218	1284 aa		32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	ZHX1	Q9UKY1	873 aa	Predicted RBP	32.2	■■■□□ 2.75
PPP1R35-204	ENST00000487452	TFRC	P02786	760 aa	Known RBP	32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms