RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
PFDN4-204ENST00000487129 HERC6Q8IVU3 1022 aa17.77■□□□□ 0.44
PFDN4-204ENST00000487129 NEDD1Q8NHV4 660 aa17.77■□□□□ 0.44
PFDN4-204ENST00000487129 PHOSPHO2Q8TCD6 241 aa17.77■□□□□ 0.44
PFDN4-204ENST00000487129 STAG1Q8WVM7 1258 aa17.77■□□□□ 0.44
PFDN4-204ENST00000487129 ARNTL2Q8WYA1 636 aa17.77■□□□□ 0.44
PFDN4-204ENST00000487129 TANC1Q9C0D5 1861 aa17.77■□□□□ 0.43
PFDN4-204ENST00000487129 PLA2G6O60733 806 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 SUPT20HL2P0C7V6 817 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 ALAS1P13196 640 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 SNAP25P60880 206 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 FAM160B2Q86V87 743 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
PFDN4-204ENST00000487129 APPBP2Q92624 585 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 HLA-CQ95604 372 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
PFDN4-204ENST00000487129 TET1Q8NFU7 2136 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 FAM86C2PA6NEL3 165 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 HMMRO75330 724 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 IQCF3P0C7M6 154 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 KIAA1211Q6ZU35 1233 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 PPP1R13LQ8WUF5 828 aa17.75■□□□□ 0.43
PFDN4-204ENST00000487129 RBM47A0AV96 593 aaKnown RBP17.74■□□□□ 0.43
PFDN4-204ENST00000487129 M0R2C6 588 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 PITPNM1O00562 1244 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 GPAA1O43292 621 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 MCCP23508 829 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 RFC2P35250 354 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 SLC1A4P43007 532 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 GPNMBQ14956 572 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 CHURC1Q8WUH1 139 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 CHMP4CQ96CF2 233 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
PFDN4-204ENST00000487129 LCHNA4D1U4 455 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 PI4K2BG5E9Z4 385 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 ACTN1P12814 892 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 NBPF20Q3BBV1 942 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 DIEXFQ68CQ4 756 aaKnown RBP17.73■□□□□ 0.43
PFDN4-204ENST00000487129 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 CTAGE1Q96RT6 745 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
PFDN4-204ENST00000487129 RBAK-RBAKDNI3L0D1 243 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 SMARCA5O60264 1052 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-204ENST00000487129 TDO2P48775 406 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-204ENST00000487129 TFAP4Q01664 338 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 NSMFQ6X4W1 530 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 IFNL3Q8IZI9 196 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 MTG1Q9BT17 334 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-204ENST00000487129 ZNF287Q9HBT7 754 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 IL17RBQ9NRM6 502 aa17.72■□□□□ 0.43
PFDN4-204ENST00000487129 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
PFDN4-204ENST00000487129 ICAM1P05362 532 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 MYL3P08590 195 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 TSPY3P0CV98 308 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 TSPY8P0CW00 308 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 BAATQ14032 418 aaPredicted RBP17.71■□□□□ 0.43
PFDN4-204ENST00000487129 RCSD1Q6JBY9 416 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 NFRKBQ6P4R8 1299 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 TMCO2Q7Z6W1 182 aaPredicted RBP17.71■□□□□ 0.43
PFDN4-204ENST00000487129 GDPD5Q8WTR4 605 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
PFDN4-204ENST00000487129 PATL2C9JE40 543 aaKnown RBP17.7■□□□□ 0.42
PFDN4-204ENST00000487129 NFIBO00712 420 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 FOXP2O15409 715 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 BAIAP3O94812 1187 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 GNAT2P19087 354 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 NOVP48745 357 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 CPT1AP50416 773 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
PFDN4-204ENST00000487129 TSHZ3Q63HK5 1081 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 LRRCC1Q9C099 1032 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 RANBP17Q9H2T7 1088 aaKnown RBP17.7■□□□□ 0.42
PFDN4-204ENST00000487129 CCPG1Q9ULG6 757 aa17.7■□□□□ 0.42
PFDN4-204ENST00000487129 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
PFDN4-204ENST00000487129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
PFDN4-204ENST00000487129 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
PFDN4-204ENST00000487129 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 A6NJR5 290 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 NMT2O60551 498 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 EDNRBP24530 442 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 WDR5P61964 334 aaKnown RBP17.69■□□□□ 0.42
PFDN4-204ENST00000487129 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
PFDN4-204ENST00000487129 TCTN1Q2MV58 587 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 MIER1Q8N108 512 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 OR6J1Q8NGC5 347 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 COPS5Q92905 334 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
PFDN4-204ENST00000487129 LMCD1Q9NZU5 365 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
PFDN4-204ENST00000487129 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 DEFB103AP81534 67 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 PTPN11Q06124 597 aaPredicted RBP17.68■□□□□ 0.42
PFDN4-204ENST00000487129 PPARAQ07869 468 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 FAM47CQ5HY64 1035 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 SLC30A10Q6XR72 485 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 CLEC4DQ8WXI8 215 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms