RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 AP5M1Q9H0R1 490 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 MROH7Q68CQ1 1323 aa22.3■■□□□ 1.16
CLIP2-206ENST00000487091 DCDC2CA8MYV0 355 aa22.29■■□□□ 1.16
CLIP2-206ENST00000487091 CDK7P50613 346 aa22.29■■□□□ 1.16
CLIP2-206ENST00000487091 USH1GQ495M9 461 aa22.29■■□□□ 1.16
CLIP2-206ENST00000487091 KIAA1211Q6ZU35 1233 aa22.29■■□□□ 1.16
CLIP2-206ENST00000487091 MAP4K1Q92918 833 aa22.29■■□□□ 1.16
CLIP2-206ENST00000487091 MPHOSPH6Q99547 160 aaKnown RBP22.29■■□□□ 1.16
CLIP2-206ENST00000487091 ABCB11O95342 1321 aa22.29■■□□□ 1.16
CLIP2-206ENST00000487091 A0A0U1RQG5 324 aaPredicted RBP22.28■■□□□ 1.16
CLIP2-206ENST00000487091 DYNC1LI2O43237 492 aaPredicted RBP22.28■■□□□ 1.16
CLIP2-206ENST00000487091 CABYRO75952 493 aa22.28■■□□□ 1.16
CLIP2-206ENST00000487091 FAAP100Q0VG06 881 aa22.28■■□□□ 1.16
CLIP2-206ENST00000487091 FSCN1Q16658 493 aaKnown RBP22.28■■□□□ 1.16
CLIP2-206ENST00000487091 VTI1AQ96AJ9 217 aa22.28■■□□□ 1.16
CLIP2-206ENST00000487091 TMEM39AQ9NV64 488 aa22.28■■□□□ 1.16
CLIP2-206ENST00000487091 MYH6P13533 1939 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 RBM47A0AV96 593 aaKnown RBP22.27■■□□□ 1.16
CLIP2-206ENST00000487091 B4DLN1 442 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 ARVCFO00192 962 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 ZEB2O60315 1214 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 EDNRBP24530 442 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 MRPL12P52815 198 aaKnown RBP22.27■■□□□ 1.16
CLIP2-206ENST00000487091 BEX3Q00994 111 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 QRICH1Q2TAL8 776 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 DUSP28Q4G0W2 176 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 NCOA7Q8NI08 942 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 JMJD4Q9H9V9 463 aa22.27■■□□□ 1.16
CLIP2-206ENST00000487091 E7EWF7 191 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 RAG1P15918 1043 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 RALYLQ86SE5 291 aaKnown RBP22.26■■□□□ 1.15
CLIP2-206ENST00000487091 FBXO11Q86XK2 927 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 MCF2L2Q86YR7 1114 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 STAG2Q8N3U4 1231 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 SEZ6LQ9BYH1 1024 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 WDR11Q9BZH6 1224 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 VAT1LQ9HCJ6 419 aa22.26■■□□□ 1.15
CLIP2-206ENST00000487091 MRPL11Q9Y3B7 192 aaKnown RBP22.26■■□□□ 1.15
CLIP2-206ENST00000487091 ERICH2A1L162 156 aa22.25■■□□□ 1.15
CLIP2-206ENST00000487091 PALM3A6NDB9 673 aaPredicted RBP22.25■■□□□ 1.15
CLIP2-206ENST00000487091 KLRF2D3W0D1 207 aa22.25■■□□□ 1.15
CLIP2-206ENST00000487091 IFIT3O14879 490 aaKnown RBP22.25■■□□□ 1.15
CLIP2-206ENST00000487091 DHX16O60231 1041 aaKnown RBP22.25■■□□□ 1.15
CLIP2-206ENST00000487091 ITGB8P26012 769 aa22.25■■□□□ 1.15
CLIP2-206ENST00000487091 PDE4DQ08499 809 aa22.25■■□□□ 1.15
CLIP2-206ENST00000487091 SART3Q15020 963 aaKnown RBP22.25■■□□□ 1.15
CLIP2-206ENST00000487091 MAD2L2Q9UI95 211 aa22.25■■□□□ 1.15
CLIP2-206ENST00000487091 RBM8AQ9Y5S9 174 aaKnown RBP22.25■■□□□ 1.15
CLIP2-206ENST00000487091 TAF6LQ9Y6J9 622 aa22.25■■□□□ 1.15
CLIP2-206ENST00000487091 SHHQ15465 462 aa22.24■■□□□ 1.15
CLIP2-206ENST00000487091 TMEM63BQ5T3F8 832 aa22.24■■□□□ 1.15
CLIP2-206ENST00000487091 CXCL17Q6UXB2 119 aa22.24■■□□□ 1.15
CLIP2-206ENST00000487091 CENPQQ7L2Z9 268 aaPredicted RBP22.24■■□□□ 1.15
CLIP2-206ENST00000487091 SLC43A3Q8NBI5 491 aa22.24■■□□□ 1.15
CLIP2-206ENST00000487091 MTMR8Q96EF0 704 aa22.24■■□□□ 1.15
CLIP2-206ENST00000487091 TBX21Q9UL17 535 aa22.24■■□□□ 1.15
CLIP2-206ENST00000487091 NKRFO15226 690 aaKnown RBP eCLIP22.23■■□□□ 1.15
CLIP2-206ENST00000487091 TLR3O15455 904 aaKnown RBP22.23■■□□□ 1.15
CLIP2-206ENST00000487091 TIMP1P01033 207 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 PTGS1P23219 599 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 WTAPQ15007 396 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 STOX1Q6ZVD7 989 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 SCFD2Q8WU76 684 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 TBC1D5Q92609 795 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 AMNQ9BXJ7 453 aa22.23■■□□□ 1.15
CLIP2-206ENST00000487091 GRM4Q14833 912 aa22.22■■□□□ 1.15
CLIP2-206ENST00000487091 SYTL5Q8TDW5 730 aaPredicted RBP22.22■■□□□ 1.15
CLIP2-206ENST00000487091 NSUN6Q8TEA1 469 aaKnown RBP22.22■■□□□ 1.15
CLIP2-206ENST00000487091 ZBTB5O15062 677 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 TROAPQ12815 778 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 ITGA7Q13683 1181 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 C9orf50Q5SZB4 431 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 MB21D2Q8IYB1 491 aaPredicted RBP22.21■■□□□ 1.15
CLIP2-206ENST00000487091 DEFB123Q8N688 67 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 IGDCC4Q8TDY8 1250 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 IWS1Q96ST2 819 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 ESYT1Q9BSJ8 1104 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 MTA3Q9BTC8 594 aa22.21■■□□□ 1.15
CLIP2-206ENST00000487091 CD4P01730 458 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 CPT1AP50416 773 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 GHRHRQ02643 423 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 FPGSQ05932 587 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 TRAF1Q13077 416 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 PPP2R5BQ15173 497 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 BMP2KLQ5H9B9 411 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 TMEM67Q5HYA8 995 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 FAM109BQ6ICB4 259 aaPredicted RBP22.2■■□□□ 1.14
CLIP2-206ENST00000487091 CHST3Q7LGC8 479 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 SAMD3Q8N6K7 520 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 TAAR1Q96RJ0 339 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 LSG1Q9H089 658 aaKnown RBP22.2■■□□□ 1.14
CLIP2-206ENST00000487091 RIOX1Q9H6W3 641 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 SENP2Q9HC62 589 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 POLR3EQ9NVU0 708 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 MAP3K20Q9NYL2 800 aaKnown RBP22.2■■□□□ 1.14
CLIP2-206ENST00000487091 COL20A1Q9P218 1284 aa22.2■■□□□ 1.14
CLIP2-206ENST00000487091 BAZ2BQ9UIF8 2168 aaKnown RBP22.19■■□□□ 1.14
CLIP2-206ENST00000487091 LAMA2P24043 3122 aaKnown RBP22.19■■□□□ 1.14
CLIP2-206ENST00000487091 ANTXR2P58335 489 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms