RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 ADAMTS4O75173 837 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 CLTBP09497 229 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 PDHBP11177 359 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 LIFRP42702 1097 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 C1orf53Q5VUE5 145 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 TTBK2Q6IQ55 1244 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 RNF180Q86T96 592 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 FAM160B2Q86V87 743 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 TMTC2Q8N394 836 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 CHURC1Q8WUH1 139 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 ALDH8A1Q9H2A2 487 aaPredicted RBP15.2■□□□□ 0.02
NR1H3-223ENST00000486991 PRR12Q9ULL5 1215 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 DIS3Q9Y2L1 958 aaKnown RBP15.2■□□□□ 0.02
NR1H3-223ENST00000486991 VCANP13611 3396 aa15.2■□□□□ 0.02
NR1H3-223ENST00000486991 KLF18A0A0U1RQI7 1052 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 ADCY6O43306 1168 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 AKR1A1P14550 325 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 SNAP25P60880 206 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 ANKS1AQ92625 1134 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 DDX11Q96FC9 970 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 AGBL1Q96MI9 1066 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 AGXT2Q9BYV1 514 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 FBXO40Q9UH90 709 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 NRBP1Q9UHY1 535 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 ZHX1Q9UKY1 873 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-223ENST00000486991 ISY1Q9ULR0 285 aaKnown RBP15.19■□□□□ 0.02
NR1H3-223ENST00000486991 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
NR1H3-223ENST00000486991 SPTBN5Q9NRC6 3674 aaKnown RBP15.19■□□□□ 0.02
NR1H3-223ENST00000486991 SYNRGQ9UMZ2 1314 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 KIAA0355O15063 1070 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 CD2BP2O95400 341 aaKnown RBP15.18■□□□□ 0.02
NR1H3-223ENST00000486991 RAG1P15918 1043 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 ACLYP53396 1101 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 ZNF543Q08ER8 600 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 FAAP100Q0VG06 881 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 KCNA10Q16322 511 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 FBXL16Q8N461 479 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 PNMA1Q8ND90 353 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 RNPC3Q96LT9 517 aaKnown RBP15.18■□□□□ 0.02
NR1H3-223ENST00000486991 RANBP17Q9H2T7 1088 aaKnown RBP15.18■□□□□ 0.02
NR1H3-223ENST00000486991 TMEM39AQ9NV64 488 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
NR1H3-223ENST00000486991 ASTN1O14525 1302 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 FRMPD2Q68DX3 1309 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 SLC16A2P36021 539 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 SMAD3P84022 425 aaKnown RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 IKQ13123 557 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 CCDC96Q2M329 555 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 CCSAPQ6IQ19 270 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 SGMS1Q86VZ5 419 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 ZNF654Q8IZM8 581 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 KLHDC9Q8NEP7 349 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 MAFAQ8NHW3 353 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 A1CFQ9NQ94 594 aaKnown RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
NR1H3-223ENST00000486991 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
NR1H3-223ENST00000486991 ZBTB43O43298 467 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 RXRAP19793 462 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 PTGS1P23219 599 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 MCM2P49736 904 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 CNTN2Q02246 1040 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 STK3Q13188 491 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 MUM1L1Q5H9M0 696 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 SYDE2Q5VT97 1194 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 APOA5Q6Q788 366 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 MAMDC4Q6UXC1 1216 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 MSL3Q8N5Y2 521 aaKnown RBP15.16■□□□□ 0.02
NR1H3-223ENST00000486991 FAM133AQ8N9E0 248 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 STARD7Q9NQZ5 370 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 HOMER2Q9NSB8 354 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-223ENST00000486991 TPCN1Q9ULQ1 816 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 LIMCH1Q9UPQ0 1083 aa15.16■□□□□ 0.02
NR1H3-223ENST00000486991 RBM19Q9Y4C8 960 aaKnown RBP15.16■□□□□ 0.02
NR1H3-223ENST00000486991 CHD9Q3L8U1 2897 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 DDAH1O94760 285 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 FPGSQ05932 587 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 ACVR2BQ13705 512 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 TKFCQ3LXA3 575 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 ZNF467Q7Z7K2 595 aaPredicted RBP15.15■□□□□ 0.02
NR1H3-223ENST00000486991 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 TSEN34Q9BSV6 310 aaKnown RBP15.15■□□□□ 0.02
NR1H3-223ENST00000486991 KATNBL1Q9H079 304 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 CPVLQ9H3G5 476 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms