RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 NEK4P51957 841 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 GJA9P57773 515 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 CCDC178Q5BJE1 867 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 CYB5R4Q7L1T6 521 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 EEPD1Q7L9B9 569 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 PCSK9Q8NBP7 692 aaKnown RBP17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 GLT1D1Q96MS3 346 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 ZSCAN10Q96SZ4 725 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 UPF3AQ9H1J1 476 aaKnown RBP17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
SEMA4D-219ENST00000486935 PLXNA1Q9UIW2 1896 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 PTPDC1A2A3K4 754 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 ASGR1P07306 291 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 MCM5P33992 734 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 NT5C2P49902 561 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 PNMA1Q8ND90 353 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 PDGFCQ9NRA1 345 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 TMEM39AQ9NV64 488 aa17.97■□□□□ 0.47
SEMA4D-219ENST00000486935 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 DYNC1LI2O43237 492 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 PRC1O43663 620 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 CALML3P27482 149 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 CST5P28325 142 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 BEX3Q00994 111 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 GPATCH4Q5T3I0 446 aaKnown RBP17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 GPR153Q6NV75 609 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 ANKRD33Q7Z3H0 272 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 FBXO16Q8IX29 292 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 DEFB123Q8N688 67 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 ANKS1AQ92625 1134 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 AP5M1Q9H0R1 490 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 PDRG1Q9NUG6 133 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 PNMA2Q9UL42 364 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 RBM19Q9Y4C8 960 aaKnown RBP17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 SMCHD1A6NHR9 2005 aa17.96■□□□□ 0.47
SEMA4D-219ENST00000486935 RAG1P15918 1043 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 SMPD1P17405 629 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 PTGS1P23219 599 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 ITGB8P26012 769 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 ANTXR2P58335 489 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 FAAP100Q0VG06 881 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 SHHQ15465 462 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 TAPT1Q6NXT6 567 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 Q7L0L9 218 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 TOX2Q96NM4 488 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 ADD3Q9UEY8 706 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 GNEQ9Y223 722 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 ELP1O95163 1332 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 LAMA3Q16787 3333 aa17.95■□□□□ 0.46
SEMA4D-219ENST00000486935 KIAA0355O15063 1070 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 CTAGE5O15320 804 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 ST18O60284 1047 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 FGD1P98174 961 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 USH1GQ495M9 461 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 C9orf50Q5SZB4 431 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 TMEM63BQ5T3F8 832 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 SLC30A10Q6XR72 485 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 Q6ZUG5 572 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 TLK2Q86UE8 772 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 TNKSO95271 1327 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
SEMA4D-219ENST00000486935 CDK7P50613 346 aa17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 ALDH5A1P51649 535 aaPredicted RBP17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 NKX3-2P78367 333 aa17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 FSCN1Q16658 493 aaKnown RBP17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 MORC4Q8TE76 937 aa17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 VAT1LQ9HCJ6 419 aa17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 VTA1Q9NP79 307 aa17.93■□□□□ 0.46
SEMA4D-219ENST00000486935 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 ARVCFO00192 962 aa17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 IFIT3O14879 490 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 PARP1P09874 1014 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 AK2P54819 239 aa17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 RPS6P62753 249 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 ASPRV1Q53RT3 343 aa17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 IFIT1BQ5T764 474 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 CXCL17Q6UXB2 119 aa17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 ADGRF4Q8IZF3 695 aa17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 GPHNQ9NQX3 736 aaPredicted RBP17.92■□□□□ 0.46
SEMA4D-219ENST00000486935 ERICH2A1L162 156 aa17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 ZEB2O60315 1214 aa17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 PDE4DQ08499 809 aa17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 SART3Q15020 963 aaKnown RBP17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 CDC37Q16543 378 aaPredicted RBP17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 TMEM67Q5HYA8 995 aa17.91■□□□□ 0.46
SEMA4D-219ENST00000486935 TMEM87BQ96K49 555 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms