RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CD248Q9HCU0 757 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 SNX12Q9UMY4 172 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 AKAP11Q9UKA4 1901 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 KLRC4O43908 158 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 HSF2BPO75031 334 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 GNAT2P19087 354 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 HNRNPH1P31943 449 aaKnown RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 ELOA2Q8IYF1 753 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 TRIM31Q9BZY9 425 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 MROH5Q6ZUA9 1318 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 SEMA3EO15041 775 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 IFT88Q13099 833 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 TRIM14Q14142 442 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 ADAT2Q7Z6V5 191 aaKnown RBP13.75□□□□□ -0.21
HSPG2-211ENST00000486901 CABP7Q86V35 215 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 EFCAB13Q8IY85 973 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 KIRREL3Q8IZU9 778 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 A0A087WUV0 522 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-211ENST00000486901 HEXIM1O94992 359 aaKnown RBP13.75□□□□□ -0.21
HSPG2-211ENST00000486901 P2RX5Q93086 422 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 RIOK1Q9BRS2 568 aaKnown RBP13.75□□□□□ -0.21
HSPG2-211ENST00000486901 PACSIN1Q9BY11 444 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 FRMD3A2A2Y4 597 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 USO1O60763 962 aaKnown RBP13.75□□□□□ -0.21
HSPG2-211ENST00000486901 SRGNP10124 158 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 PDE6BP35913 854 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 AARSP49588 968 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■□□ 15.2
HSPG2-211ENST00000486901 VAV2P52735 878 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 TUBB2AQ13885 445 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 TUBB2BQ9BVA1 445 aa13.75□□□□□ -0.21
HSPG2-211ENST00000486901 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 PNMA1Q8ND90 353 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 POTEMA6NI47 508 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 EIF3HO15372 352 aaKnown RBP eCLIP13.74□□□□□ -0.213e-6■□□□□ 10.1
HSPG2-211ENST00000486901 ZBED6P86452 979 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 PPFIA1Q13136 1202 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 CFAP58Q5T655 872 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 AENQ8WTP8 325 aaKnown RBP13.74□□□□□ -0.21
HSPG2-211ENST00000486901 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 GRIN2DO15399 1336 aa13.74□□□□□ -0.21
HSPG2-211ENST00000486901 PDS5AQ29RF7 1337 aaKnown RBP13.74□□□□□ -0.21
HSPG2-211ENST00000486901 SMIM23A6NLE4 172 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 E7EVH7 732 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 GUCY2CP25092 1073 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 TMOD1P28289 359 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 MECOMQ03112 1051 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-211ENST00000486901 DIXDC1Q155Q3 683 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 MIIPQ5JXC2 388 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 NAA35Q5VZE5 725 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 KIAA0754O94854 1291 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 SLC35G1Q2M3R5 365 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 CEP85LQ5SZL2 805 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 C4orf32Q8N8J7 132 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 STIM2Q9P246 746 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 SLIT3O75094 1523 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 HDLBPQ00341 1268 aaKnown RBP13.73□□□□□ -0.21
HSPG2-211ENST00000486901 PFKFB3Q16875 520 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-211ENST00000486901 MMS22LQ6ZRQ5 1243 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 KIAA0895Q8NCT3 520 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
HSPG2-211ENST00000486901 ZNF335Q9H4Z2 1342 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 HGSO14964 777 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 CYTH3O43739 400 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 RPS6KA5O75582 802 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 PALMO75781 387 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 FECHP22830 423 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 NAPAP54920 295 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 LLGL1Q15334 1064 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 ODF2Q5BJF6 829 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 TXNRD3Q86VQ6 643 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 CEP57Q86XR8 500 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 UHMK1Q8TAS1 419 aaKnown RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 DCP1AQ9NPI6 582 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 BMP15O95972 392 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 EEF1GP26641 437 aaKnown RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 RAPGEF1Q13905 1077 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 TRIM9Q9C026 710 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 ADAMTS1Q9UHI8 967 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms