RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 BRF1Q92994 677 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 MYH7BA7E2Y1 1941 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 ASB14A6NK59 587 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 DHX16O60231 1041 aaKnown RBP15.26■□□□□ 0.03
SF1-216ENST00000486867 MYCP01106 439 aaPredicted RBP15.26■□□□□ 0.03
SF1-216ENST00000486867 EDNRBP24530 442 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
SF1-216ENST00000486867 RTN1Q16799 776 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 NSMFQ6X4W1 530 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 MCF2L2Q86YR7 1114 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 DNERQ8NFT8 737 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 ABHD16BQ9H3Z7 469 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 DDX20Q9UHI6 824 aaKnown RBP15.26■□□□□ 0.03
SF1-216ENST00000486867 PCDHA1Q9Y5I3 950 aa15.26■□□□□ 0.03
SF1-216ENST00000486867 ALDH5A1P51649 535 aaPredicted RBP15.25■□□□□ 0.03
SF1-216ENST00000486867 APOBRQ0VD83 1088 aa15.25■□□□□ 0.03
SF1-216ENST00000486867 CCDC144CPQ8IYA2 1237 aa15.25■□□□□ 0.03
SF1-216ENST00000486867 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
SF1-216ENST00000486867 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.25■□□□□ 0.03
SF1-216ENST00000486867 ADD3Q9UEY8 706 aaKnown RBP15.25■□□□□ 0.03
SF1-216ENST00000486867 PTPDC1A2A3K4 754 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 GOLGA8AA7E2F4 631 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 GOLGA8BA8MQT2 603 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 CDC27P30260 824 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 PRAMEF19Q5SWL8 479 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 TEX2Q8IWB9 1127 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 SYTL5Q8TDW5 730 aaPredicted RBP15.24■□□□□ 0.03
SF1-216ENST00000486867 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 ZNF274Q96GC6 653 aaPredicted RBP15.24■□□□□ 0.03
SF1-216ENST00000486867 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
SF1-216ENST00000486867 COL20A1Q9P218 1284 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 CNPY2Q9Y2B0 182 aa15.24■□□□□ 0.03
SF1-216ENST00000486867 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 PDIA3P30101 505 aaKnown RBP15.23■□□□□ 0.03
SF1-216ENST00000486867 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.03
SF1-216ENST00000486867 NKX3-2P78367 333 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 FGD1P98174 961 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 NTRK3Q16288 839 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 RAB11FIP4Q86YS3 637 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 CMTR1Q8N1G2 835 aaKnown RBP15.23■□□□□ 0.03
SF1-216ENST00000486867 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
SF1-216ENST00000486867 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 DNAH12Q6ZR08 3092 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 CEP290O15078 2479 aa15.23■□□□□ 0.03
SF1-216ENST00000486867 FRMPD4Q14CM0 1322 aa15.22■□□□□ 0.03
SF1-216ENST00000486867 RBM47A0AV96 593 aaKnown RBP15.22■□□□□ 0.03
SF1-216ENST00000486867 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
SF1-216ENST00000486867 AKR1A1P14550 325 aa15.22■□□□□ 0.03
SF1-216ENST00000486867 CALML3P27482 149 aa15.22■□□□□ 0.03
SF1-216ENST00000486867 ADD1P35611 737 aaKnown RBP15.22■□□□□ 0.03
SF1-216ENST00000486867 RBM25P49756 843 aaKnown RBP15.22■□□□□ 0.03
SF1-216ENST00000486867 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
SF1-216ENST00000486867 PDRG1Q9NUG6 133 aa15.22■□□□□ 0.03
SF1-216ENST00000486867 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
SF1-216ENST00000486867 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
SF1-216ENST00000486867 FARP2O94887 1054 aaPredicted RBP15.21■□□□□ 0.03
SF1-216ENST00000486867 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.03
SF1-216ENST00000486867 COL6A1P12109 1028 aa15.21■□□□□ 0.03
SF1-216ENST00000486867 MLLT1Q03111 559 aaPredicted RBP15.21■□□□□ 0.03
SF1-216ENST00000486867 TAPT1Q6NXT6 567 aa15.21■□□□□ 0.03
SF1-216ENST00000486867 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
SF1-216ENST00000486867 IWS1Q96ST2 819 aa15.21■□□□□ 0.03
SF1-216ENST00000486867 KIF2CQ99661 725 aa15.21■□□□□ 0.03
SF1-216ENST00000486867 UPF3AQ9H1J1 476 aaKnown RBP15.21■□□□□ 0.03
SF1-216ENST00000486867 FAM184BQ9ULE4 1060 aa15.21■□□□□ 0.03
SF1-216ENST00000486867 ADCY6O43306 1168 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 DUSP11O75319 330 aaKnown RBP15.2■□□□□ 0.02
SF1-216ENST00000486867 CFBP00751 764 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 IFNAR1P17181 557 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 CNGA1P29973 690 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 CCDC144BQ3MJ40 725 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 PPP1R18Q6NYC8 613 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 NSUN6Q8TEA1 469 aaKnown RBP15.2■□□□□ 0.02
SF1-216ENST00000486867 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
SF1-216ENST00000486867 DOCK5Q9H7D0 1870 aa15.2■□□□□ 0.02
SF1-216ENST00000486867 SCN10AQ9Y5Y9 1956 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 B4DLN1 442 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 DNM1LO00429 736 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 MEIS2O14770 477 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 ADAMTS4O75173 837 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 POLR2MP0CAP2 368 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 RARBP10826 455 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 CST5P28325 142 aaPredicted RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 MRPL12P52815 198 aaKnown RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 RMDN3Q96TC7 470 aa15.19■□□□□ 0.02
SF1-216ENST00000486867 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 PXMP2Q9NR77 195 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms