RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 SGMS1Q86VZ5 419 aa18.54■□□□□ 0.56
HDAC8-218ENST00000486704 KLHDC9Q8NEP7 349 aa18.54■□□□□ 0.56
HDAC8-218ENST00000486704 CTCFLQ8NI51 663 aaPredicted RBP18.54■□□□□ 0.56
HDAC8-218ENST00000486704 KCNB2Q92953 911 aa18.54■□□□□ 0.56
HDAC8-218ENST00000486704 NEK1Q96PY6 1258 aa18.54■□□□□ 0.56
HDAC8-218ENST00000486704 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
HDAC8-218ENST00000486704 SPZ1Q9BXG8 430 aa18.54■□□□□ 0.56
HDAC8-218ENST00000486704 MOXD2PA6NHM9 499 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 CCDC69A6NI79 296 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
HDAC8-218ENST00000486704 PPP1R11O60927 126 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-218ENST00000486704 REC8O95072 547 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 CALM1P0DP23 149 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 CALM2P0DP24 149 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 CALM3P0DP25 149 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 ADCYAP1R1P41586 468 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 CCSAPQ6IQ19 270 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-218ENST00000486704 TAPT1Q6NXT6 567 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 FBXO16Q8IX29 292 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-218ENST00000486704 RASEFQ8IZ41 740 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 SAMD3Q8N6K7 520 aa18.53■□□□□ 0.56
HDAC8-218ENST00000486704 B4DLN1 442 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 OPLAHO14841 1288 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
HDAC8-218ENST00000486704 HSPA4P34932 840 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 HSD17B4P51659 736 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 MRPL12P52815 198 aaKnown RBP18.52■□□□□ 0.56
HDAC8-218ENST00000486704 TNFAIP2Q03169 654 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 IQSEC1Q6DN90 963 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 SLC39A5Q6ZMH5 540 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 NFXL1Q6ZNB6 911 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 NUP133Q8WUM0 1156 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 PIGSQ96S52 555 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 MYL10Q9BUA6 226 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 PRO3102Q9H379 93 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 SPC25Q9HBM1 224 aa18.52■□□□□ 0.56
HDAC8-218ENST00000486704 MAP3K20Q9NYL2 800 aaKnown RBP18.52■□□□□ 0.56
HDAC8-218ENST00000486704 GNEQ9Y223 722 aaKnown RBP18.52■□□□□ 0.56
HDAC8-218ENST00000486704 DDX49Q9Y6V7 483 aaKnown RBP18.52■□□□□ 0.56
HDAC8-218ENST00000486704 PNMA6FA0A0J9YX94 578 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 A0A1W2PQ45 241 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 A0A1W2PQY0 241 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 RBM47A0AV96 593 aaKnown RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 GNAQP50148 359 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 ACLYP53396 1101 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 RTP1P59025 263 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 EXOSC10Q01780 885 aaKnown RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 ADCK5Q3MIX3 580 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 DHX32Q7L7V1 743 aaKnown RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 HOMER1Q86YM7 354 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 SYTL5Q8TDW5 730 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 COLQQ9Y215 455 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-218ENST00000486704 Q9Y3F1 56 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 PCDHA1Q9Y5I3 950 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 SLC12A7Q9Y666 1083 aa18.51■□□□□ 0.55
HDAC8-218ENST00000486704 MYADML2A6NDP7 307 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 CTAGE5O15320 804 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 C6orf222P0C671 652 aaPredicted RBP18.5■□□□□ 0.55
HDAC8-218ENST00000486704 ATN1P54259 1190 aaPredicted RBP18.5■□□□□ 0.55
HDAC8-218ENST00000486704 PDE4DQ08499 809 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 CHRDL2Q6WN34 429 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 EEPD1Q7L9B9 569 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 TLK2Q86UE8 772 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 PCSK9Q8NBP7 692 aaKnown RBP18.5■□□□□ 0.55
HDAC8-218ENST00000486704 TBC1D5Q92609 795 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 LRRC2Q9BYS8 371 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 PDGFCQ9NRA1 345 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 COL20A1Q9P218 1284 aa18.5■□□□□ 0.55
HDAC8-218ENST00000486704 SMPD1P17405 629 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 KCNA10Q16322 511 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 DUSP28Q4G0W2 176 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 HABP4Q5JVS0 413 aaKnown RBP18.49■□□□□ 0.55
HDAC8-218ENST00000486704 APOA5Q6Q788 366 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 NSUN6Q8TEA1 469 aaKnown RBP18.49■□□□□ 0.55
HDAC8-218ENST00000486704 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 IWS1Q96ST2 819 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 ZMYND8Q9ULU4 1186 aaPredicted RBP18.49■□□□□ 0.55
HDAC8-218ENST00000486704 TRIOBPQ9H2D6 2365 aa18.49■□□□□ 0.55
HDAC8-218ENST00000486704 RANBP2P49792 3224 aaKnown RBP18.49■□□□□ 0.55
HDAC8-218ENST00000486704 CFBP00751 764 aa18.48■□□□□ 0.55
HDAC8-218ENST00000486704 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
HDAC8-218ENST00000486704 TAAR1Q96RJ0 339 aa18.48■□□□□ 0.55
HDAC8-218ENST00000486704 RMDN3Q96TC7 470 aa18.48■□□□□ 0.55
HDAC8-218ENST00000486704 GDF15Q99988 308 aa18.48■□□□□ 0.55
HDAC8-218ENST00000486704 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
HDAC8-218ENST00000486704 ELP1O95163 1332 aa18.48■□□□□ 0.55
HDAC8-218ENST00000486704 A0A1W2PPC1 479 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 PLEKHA8P1O95397 391 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 ASGR1P07306 291 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 SYN1P17600 705 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 RCAN1P53805 252 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 IRX5P78411 483 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-218ENST00000486704 TRIM60Q495X7 471 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 GNASQ5JWF2 1037 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
HDAC8-218ENST00000486704 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms