RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CENPQQ7L2Z9 268 aaPredicted RBP7.39□□□□□ -1.23
USP41-204ENST00000486536 CYFIP1Q7L576 1253 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 KRT27Q7Z3Y8 459 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 DNAAF4Q8WXU2 420 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 ELMO3Q96BJ8 720 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 WDR89Q96FK6 387 aaPredicted RBP7.39□□□□□ -1.23
USP41-204ENST00000486536 NRSN2Q9GZP1 204 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 JPH1Q9HDC5 661 aaPredicted RBP7.39□□□□□ -1.23
USP41-204ENST00000486536 GGA1Q9UJY5 639 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 WNK3Q9BYP7 1800 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 ATP10DQ9P241 1426 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 ASMTLO95671 621 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 GNAI3P08754 354 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 LIG1P18858 919 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 PDE4BQ07343 736 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 TMEM201Q5SNT2 666 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 C20orf204Q6ZNR8 217 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 KLHDC7BQ96G42 594 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 SLC9A7Q96T83 725 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 RWDD1Q9H446 243 aaPredicted RBP7.38□□□□□ -1.23
USP41-204ENST00000486536 CNNM2Q9H8M5 875 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 PCDHB10Q9UN67 800 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 PAPPAQ13219 1627 aa7.38□□□□□ -1.23
USP41-204ENST00000486536 PI4KAP2A4QPH2 592 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 DNAJA2O60884 412 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 ALDH1L1O75891 902 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 CTSBP07858 339 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 AFF1P51825 1210 aaKnown RBP7.37□□□□□ -1.23
USP41-204ENST00000486536 HDAC1Q13547 482 aaPredicted RBP7.37□□□□□ -1.23
USP41-204ENST00000486536 R3HDM1Q15032 1099 aaKnown RBP7.37□□□□□ -1.23
USP41-204ENST00000486536 PROSER3Q2NL68 480 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 BEND3Q5T5X7 828 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 SLC4A10Q6U841 1118 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 COPS6Q7L5N1 327 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 RPUSD2Q8IZ73 545 aaKnown RBP7.37□□□□□ -1.23
USP41-204ENST00000486536 SYNPOQ8N3V7 929 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 PI4KAP1Q8N8J0 262 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 SPATA9Q9BWV2 254 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 HDAC5Q9UQL6 1122 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 CSADQ9Y600 493 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 TOGARAM1Q9Y4F4 1720 aa7.37□□□□□ -1.23
USP41-204ENST00000486536 ADCY9O60503 1353 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 PALLDQ8WX93 1383 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 CHURC1-FNTBB4DL54 471 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 TNFRSF10CO14798 259 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 ANXA1P04083 346 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 CYP19A1P11511 503 aaPredicted RBP7.36□□□□□ -1.23
USP41-204ENST00000486536 MYL6BP14649 208 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 YY1P25490 414 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 HMGB2P26583 209 aaKnown RBP7.36□□□□□ -1.23
USP41-204ENST00000486536 GRK4P32298 578 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 NEXNQ0ZGT2 675 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 DALRD3Q5D0E6 543 aaKnown RBP7.36□□□□□ -1.23
USP41-204ENST00000486536 KIAA1211LQ6NV74 962 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 DNAJC10Q8IXB1 793 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 RPAP2Q8IXW5 612 aaPredicted RBP7.36□□□□□ -1.23
USP41-204ENST00000486536 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 LINS1Q8NG48 757 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 PLBD2Q8NHP8 589 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 XAGE3Q8WTP9 111 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 MAP3K2Q9Y2U5 619 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 CD2APQ9Y5K6 639 aa7.36□□□□□ -1.23
USP41-204ENST00000486536 FAM86C2PA6NEL3 165 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 KCNQ2O43526 872 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 A1BGP04217 495 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 GNAI2P04899 355 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 PGRP06401 933 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 SLFN14P0C7P3 912 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 HCLS1P14317 486 aaPredicted RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 IL6STP40189 918 aaPredicted RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 AIMP1Q12904 312 aaKnown RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 SUZ12Q15022 739 aaKnown RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 GNPTABQ3T906 1256 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 ZC3H12AQ5D1E8 599 aaKnown RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 NOL8Q76FK4 1167 aaKnown RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 GPR161Q8N6U8 529 aaKnown RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 GOLGA6L1Q8N7Z2 621 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 KLHL23Q8NBE8 558 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 MEIS3Q99687 375 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 METTL22Q9BUU2 404 aaPredicted RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 DDX56Q9NY93 547 aaKnown RBP7.35□□□□□ -1.23
USP41-204ENST00000486536 KLHL42Q9P2K6 505 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 KLHL3Q9UH77 587 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 ADAM30Q9UKF2 790 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 UBR2Q8IWV8 1755 aa7.35□□□□□ -1.23
USP41-204ENST00000486536 PRAMEF27A3QJZ7 478 aa7.34□□□□□ -1.23
USP41-204ENST00000486536 SUSD5O60279 629 aa7.34□□□□□ -1.23
USP41-204ENST00000486536 LILRB5O75023 590 aa7.34□□□□□ -1.23
USP41-204ENST00000486536 HMMRO75330 724 aa7.34□□□□□ -1.23
USP41-204ENST00000486536 IGHDP01880 384 aa7.34□□□□□ -1.23
USP41-204ENST00000486536 ALBP02768 609 aa7.34□□□□□ -1.23
USP41-204ENST00000486536 UBTFL1P0CB47 393 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms