RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 GOLGA6L9A6NEM1 432 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 LRRC10BA6NIK2 292 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 MARCH6O60337 910 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 MCM6Q14566 821 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 DNAJC18Q9H819 358 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 SLC39A2Q9NP94 309 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 ABHD10Q9NUJ1 306 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
SLX4-203ENST00000486524 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 DDTLA6NHG4 134 aaPredicted RBP12.62□□□□□ -0.39
SLX4-203ENST00000486524 KRT9P35527 623 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 SNAP25P60880 206 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
SLX4-203ENST00000486524 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
SLX4-203ENST00000486524 B4DLN1 442 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 CHRNA5P30532 468 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 ERVK-24P63145 666 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 TMEM266Q2M3C6 531 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 CCDC47Q96A33 483 aaKnown RBP12.61□□□□□ -0.39
SLX4-203ENST00000486524 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 NAA15Q9BXJ9 866 aaKnown RBP12.61□□□□□ -0.39
SLX4-203ENST00000486524 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 ITIH6Q6UXX5 1313 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 EDIL3O43854 480 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 MYL1P05976 194 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 ERCC3P19447 782 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 GRB10Q13322 594 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 TTI2Q6NXR4 508 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 UBXN4Q92575 508 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 MTMR9Q96QG7 549 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 EPC1Q9H2F5 836 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 CUEDC2Q9H467 287 aa12.61□□□□□ -0.39
SLX4-203ENST00000486524 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 GDF11O95390 407 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 ABL1P00519 1130 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 IDEP14735 1019 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 SV2BQ7L1I2 683 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 CUL5Q93034 780 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 PSTPIP2Q9H939 334 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 ZBTB5O15062 677 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 ECE2O60344 883 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 SLC1A4P43007 532 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 KLK7P49862 253 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 AMPD3Q01432 767 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 CERKLQ49MI3 558 aaPredicted RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 MB21D1Q8N884 522 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 P2RX5Q93086 422 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 SLF1Q9BQI6 1058 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 RIC8AQ9NPQ8 531 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 COL11A2P13942 1736 aaPredicted RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 TTC26A0AVF1 554 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 MYMKA6NI61 221 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 PODNQ7Z5L7 613 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
SLX4-203ENST00000486524 CHP1Q99653 195 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 C7orf25Q9BPX7 421 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 TUBGCP2Q9BSJ2 902 aa12.6□□□□□ -0.39
SLX4-203ENST00000486524 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
SLX4-203ENST00000486524 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
SLX4-203ENST00000486524 MTIF2P46199 727 aaKnown RBP12.59□□□□□ -0.39
SLX4-203ENST00000486524 IKQ13123 557 aaPredicted RBP12.59□□□□□ -0.39
SLX4-203ENST00000486524 SEPT2Q15019 361 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 AOC3Q16853 763 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 GPATCH4Q5T3I0 446 aaKnown RBP12.59□□□□□ -0.39
SLX4-203ENST00000486524 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 MAGEF1Q9HAY2 307 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 H0YIN7 160 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 KIF5CO60282 957 aa12.59□□□□□ -0.39
SLX4-203ENST00000486524 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms