RNA–Protein interactions for RNA: ENST00000486502.1

TNFSF13B-204, Transcript of TNF superfamily member 13b, humanhuman

TSL 5

Gene TNFSF13B, Length 395 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-204ENST00000486502 OTOP2Q7RTS6 562 aa18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 RPUSD2Q8IZ73 545 aaKnown RBP18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 SLC43A3Q8NBI5 491 aa18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 GAS2L1Q99501 681 aaPredicted RBP18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 MPHOSPH6Q99547 160 aaKnown RBP18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 PBX4Q9BYU1 374 aa18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 LNPKQ9C0E8 428 aa18.65■□□□□ 0.58
TNFSF13B-204ENST00000486502 NOVP48745 357 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 ALDH5A1P51649 535 aaPredicted RBP18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 PDE4DQ08499 809 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 HDAC1Q13547 482 aaPredicted RBP18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 DUSP28Q4G0W2 176 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 BRDTQ58F21 947 aaPredicted RBP18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 TTC14Q96N46 770 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 POLR3EQ9NVU0 708 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 GRIN2DO15399 1336 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 CDH23Q9H251 3354 aa18.64■□□□□ 0.57
TNFSF13B-204ENST00000486502 VCANP13611 3396 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 RAB30Q15771 203 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 AKNAD1Q5T1N1 836 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 ZNF589Q86UQ0 364 aaPredicted RBP18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 OR6J1Q8NGC5 347 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 MORC4Q8TE76 937 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 HERVK_113Q902F9 699 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 RNF41Q9H4P4 317 aaPredicted RBP18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 PRDM12Q9H4Q4 367 aa18.63■□□□□ 0.57
TNFSF13B-204ENST00000486502 ZBBXA8MT70 800 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 B4DLN1 442 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 ZNF213O14771 459 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 B4GALT4O60513 344 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 SUPT20HL2P0C7V6 817 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 GOLGA8HP0CJ92 632 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 PDHBP11177 359 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 IGFBP4P22692 258 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 CPT1AP50416 773 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 MRPL12P52815 198 aaKnown RBP18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 FAM47CQ5HY64 1035 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 RASIP1Q5U651 963 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 TICAM2Q86XR7 235 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 SYMPKQ92797 1274 aaKnown RBP18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 ZKSCAN3Q9BRR0 538 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 SLC28A3Q9HAS3 691 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 UMODL1Q5DID0 1318 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
TNFSF13B-204ENST00000486502 RPS6P62753 249 aaKnown RBP18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 ZNF543Q08ER8 600 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 USH1GQ495M9 461 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 SLC30A10Q6XR72 485 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 CLEC4DQ8WXI8 215 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 ESR2Q92731 530 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 SCLYQ96I15 445 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 ALDH8A1Q9H2A2 487 aaPredicted RBP18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 NKX2-4Q9H2Z4 354 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 SLC4A7Q9Y6M7 1214 aa18.61■□□□□ 0.57
TNFSF13B-204ENST00000486502 LOC102724159A0A0B4J2E5 919 aa18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 PCP11498 1178 aaKnown RBP18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 CYP2C9P11712 490 aa18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 SDSP20132 328 aa18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 PWP2Q15269 919 aaKnown RBP18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 CCDC85BQ15834 202 aaPredicted RBP18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 MTG1Q9BT17 334 aaPredicted RBP18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 TRMT13Q9NUP7 481 aaKnown RBP18.6■□□□□ 0.57
TNFSF13B-204ENST00000486502 RAD50Q92878 1312 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 RBM47A0AV96 593 aaKnown RBP18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 CCDC178Q5BJE1 867 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 CWC27Q6UX04 472 aaKnown RBP18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 DEFB128Q7Z7B8 93 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 TBC1D10CQ8IV04 446 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 VAT1LQ9HCJ6 419 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 DIAPH3Q9NSV4 1193 aa18.59■□□□□ 0.57
TNFSF13B-204ENST00000486502 CHD9Q3L8U1 2897 aa18.58■□□□□ 0.57
TNFSF13B-204ENST00000486502 TNKSO95271 1327 aa18.58■□□□□ 0.57
TNFSF13B-204ENST00000486502 RABGGTBP53611 331 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 NBPF20Q3BBV1 942 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 GPATCH4Q5T3I0 446 aaKnown RBP18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 IQCA1Q86XH1 822 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 USP38Q8NB14 1042 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 RETREG2Q8NC44 543 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 DNERQ8NFT8 737 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 SCFD2Q8WU76 684 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 PPP1R13LQ8WUF5 828 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 WNT8AQ9H1J5 351 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 CPVLQ9H3G5 476 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 KAT14Q9H8E8 782 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 NOD1Q9Y239 953 aa18.58■□□□□ 0.56
TNFSF13B-204ENST00000486502 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
TNFSF13B-204ENST00000486502 NKRFO15226 690 aaKnown RBP eCLIP18.57■□□□□ 0.56
TNFSF13B-204ENST00000486502 KPNA6O60684 536 aa18.57■□□□□ 0.56
TNFSF13B-204ENST00000486502 KDM4AO75164 1064 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms