RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 RPTNQ6XPR3 784 aa7.38□□□□□ -1.23
SMARCC1-207ENST00000485833 GTF2IRD2Q86UP8 949 aa7.38□□□□□ -1.23
SMARCC1-207ENST00000485833 LRRC56Q8IYG6 542 aaPredicted RBP7.38□□□□□ -1.23
SMARCC1-207ENST00000485833 HNRNPLLQ8WVV9 542 aaKnown RBP7.38□□□□□ -1.23
SMARCC1-207ENST00000485833 COPS5Q92905 334 aa7.38□□□□□ -1.23
SMARCC1-207ENST00000485833 LGR4Q9BXB1 951 aa7.38□□□□□ -1.23
SMARCC1-207ENST00000485833 NPHP3-ACAD11A0A0J9YXS1 232 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 DBHP09172 617 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 TACR1P25103 407 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 PLEKHN1Q494U1 663 aaPredicted RBP7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 SV2CQ496J9 727 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 ANKS3Q6ZW76 656 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 TMC6Q7Z403 805 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 ZNF227Q86WZ6 799 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 ZSCAN18Q8TBC5 510 aaPredicted RBP7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 NKX2-4Q9H2Z4 354 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 CNTD2Q9H8S5 307 aa7.37□□□□□ -1.23
SMARCC1-207ENST00000485833 GJB6O95452 261 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 CYBBP04839 570 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 MAPKAPK2P49137 400 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 NAALADL2Q58DX5 795 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 PAQR3Q6TCH7 311 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 EEPD1Q7L9B9 569 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 CPNE8Q86YQ8 564 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 BTN2A2Q8WVV5 523 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 KRTAP9-9Q9BYP9 154 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 KRTAP9-4Q9BYQ2 154 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 CYP26B1Q9NR63 512 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
SMARCC1-207ENST00000485833 SMARCA2P51531 1590 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 N4BP3O15049 544 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 TBX1O43435 398 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 ITGAVP06756 1048 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 THBDP07204 575 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 PLS3P13797 630 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 CDR1P51861 262 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 EPHB3P54753 998 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 RBM10P98175 930 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 DDR2Q16832 855 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 CIAPIN1Q6FI81 312 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 ZC3H14Q6PJT7 736 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 CELF2-AS1Q8N7Q2 184 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 EPN3Q9H201 632 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 GPRC5CQ9NQ84 441 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 CLEC1BQ9P126 229 aa7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 CNOT6Q9ULM6 557 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-207ENST00000485833 KLF4O43474 513 aa7.34□□□□□ -1.23
SMARCC1-207ENST00000485833 LZTR1Q8N653 840 aa7.34□□□□□ -1.23
SMARCC1-207ENST00000485833 SIGLEC10Q96LC7 697 aa7.34□□□□□ -1.23
SMARCC1-207ENST00000485833 MMP19Q99542 508 aa7.34□□□□□ -1.23
SMARCC1-207ENST00000485833 RWDD3Q9Y3V2 267 aa7.34□□□□□ -1.23
SMARCC1-207ENST00000485833 KIF21AQ7Z4S6 1674 aa7.34□□□□□ -1.23
SMARCC1-207ENST00000485833 C7orf72A4D263 438 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 NUAK1O60285 661 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 NPHS1O60500 1241 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 GLI4P10075 376 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 CYP4F3Q08477 520 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 SLC10A6Q3KNW5 377 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 SPOCD1Q6ZMY3 1216 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 CABP7Q86V35 215 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 LDHDQ86WU2 507 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 NPLOC4Q8TAT6 608 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 MZB1Q8WU39 189 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 GULP1Q9UBP9 304 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 IRAK3Q9Y616 596 aa7.33□□□□□ -1.24
SMARCC1-207ENST00000485833 RFXAPO00287 272 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 IRS4O14654 1257 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 HOXC12P31275 282 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 ZNF200P98182 395 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 SSPNQ14714 243 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 MBLAC2Q68D91 279 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 FRS2Q8WU20 508 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 MTA3Q9BTC8 594 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 FBLN5Q9UBX5 448 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 KCTD3Q9Y597 815 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 PCDHA5Q9Y5H7 936 aa7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 ARID1BQ8NFD5 2236 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-207ENST00000485833 NCAPD3P42695 1498 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 F8W031 263 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 AGRPO00253 132 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 PPP1R11O60927 126 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 SCG5P05408 212 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 SNRPB2P08579 225 aaKnown RBP7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 ZSCAN22P10073 491 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 PI3P19957 117 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 ZNF385BQ569K4 471 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 E4F1Q66K89 784 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 LCNL1Q6ZST4 164 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 SIAH1Q8IUQ4 282 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 IGDCC3Q8IVU1 814 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 NETO2Q8NC67 525 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 C8orf37Q96NL8 207 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.31□□□□□ -1.242e-6■■□□□ 11.5
SMARCC1-207ENST00000485833 DBR1Q9UK59 544 aaKnown RBP7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 HCFC2Q9Y5Z7 792 aa7.31□□□□□ -1.24
SMARCC1-207ENST00000485833 ZC3H12DA2A288 527 aaKnown RBP7.3□□□□□ -1.24
SMARCC1-207ENST00000485833 STK10O94804 968 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms