RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 MTIF3Q9H2K0 278 aaKnown RBP11.62□□□□□ -0.55
TMEM40-208ENST00000485124 MYO9BQ13459 2157 aa11.62□□□□□ -0.55
TMEM40-208ENST00000485124 SCN10AQ9Y5Y9 1956 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 RBM47A0AV96 593 aaKnown RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 PDHBP11177 359 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 FOSL2P15408 326 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 SMPD1P17405 629 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 ALDH5A1P51649 535 aaPredicted RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 IRX5P78411 483 aaPredicted RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 ITGA7Q13683 1181 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 NFKBIBQ15653 356 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 DUSP28Q4G0W2 176 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 CXCL17Q6UXB2 119 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 NSMFQ6X4W1 530 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 C16orf59Q7L2K0 433 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 MPHOSPH6Q99547 160 aaKnown RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 COL25A1Q9BXS0 654 aaPredicted RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 OSBPL3Q9H4L5 887 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 RNF41Q9H4P4 317 aaPredicted RBP11.61□□□□□ -0.55
TMEM40-208ENST00000485124 IL23AQ9NPF7 189 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 INCENPQ9NQS7 918 aa11.61□□□□□ -0.55
TMEM40-208ENST00000485124 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 B4DLN1 442 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 NKRFO15226 690 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM40-208ENST00000485124 DYNC1LI2O43237 492 aaPredicted RBP11.6□□□□□ -0.55
TMEM40-208ENST00000485124 CSF2RAP15509 400 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 CPT1AP50416 773 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 MRPL12P52815 198 aaKnown RBP11.6□□□□□ -0.55
TMEM40-208ENST00000485124 BEX3Q00994 111 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 CCDC178Q5BJE1 867 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 GPATCH4Q5T3I0 446 aaKnown RBP11.6□□□□□ -0.55
TMEM40-208ENST00000485124 MFSD6Q6ZSS7 791 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 DGKHQ86XP1 1220 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 FBXO16Q8IX29 292 aaPredicted RBP11.6□□□□□ -0.55
TMEM40-208ENST00000485124 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 DNERQ8NFT8 737 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 HERVK_113Q902F9 699 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 TIFAQ96CG3 184 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 KIF2CQ99661 725 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 HIPK3Q9H422 1215 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 ZNF576Q9H609 170 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 POLR3EQ9NVU0 708 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 MUC3AQ02505 3323 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 MYH6P13533 1939 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
TMEM40-208ENST00000485124 GBF1Q92538 1859 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 TRANK1O15050 2925 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 PFKMP08237 780 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 SUPT20HL2P0C7V6 817 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 EDNRBP24530 442 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 BAATQ14032 418 aaPredicted RBP11.59□□□□□ -0.55
TMEM40-208ENST00000485124 RAB30Q15771 203 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 BRDTQ58F21 947 aaPredicted RBP11.59□□□□□ -0.55
TMEM40-208ENST00000485124 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 KIAA1211Q6ZU35 1233 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 RASGRP2Q7LDG7 609 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
TMEM40-208ENST00000485124 CLEC4DQ8WXI8 215 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 ESR2Q92731 530 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 SYMPKQ92797 1274 aaKnown RBP11.59□□□□□ -0.55
TMEM40-208ENST00000485124 SNX21Q969T3 373 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 PDGFCQ9NRA1 345 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 TOMM22Q9NS69 142 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 GRIN2DO15399 1336 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 RAD50Q92878 1312 aa11.59□□□□□ -0.55
TMEM40-208ENST00000485124 NCOR1O75376 2440 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 HIP1O00291 1037 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 NFIBO00712 420 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 KPNA6O60684 536 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 FGBP02675 491 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
TMEM40-208ENST00000485124 SLC16A2P36021 539 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 SNAP25P60880 206 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.56
TMEM40-208ENST00000485124 GRIN2CQ14957 1233 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
TMEM40-208ENST00000485124 RNF207Q6ZRF8 634 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 ZNF365Q70YC5 407 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
TMEM40-208ENST00000485124 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
TMEM40-208ENST00000485124 PBX4Q9BYU1 374 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 WDR11Q9BZH6 1224 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
TMEM40-208ENST00000485124 TANC1Q9C0D5 1861 aa11.57□□□□□ -0.56
TMEM40-208ENST00000485124 PTPDC1A2A3K4 754 aa11.57□□□□□ -0.56
TMEM40-208ENST00000485124 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
TMEM40-208ENST00000485124 B4GALT4O60513 344 aa11.57□□□□□ -0.56
TMEM40-208ENST00000485124 SDSP20132 328 aa11.57□□□□□ -0.56
TMEM40-208ENST00000485124 CYP2C18P33260 490 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms