RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 DNAJC25-GNG10A0A024R161 153 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 ASB14A6NK59 587 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 ZBTB5O15062 677 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 CASTP20810 708 aaKnown RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 CCND3P30281 292 aaPredicted RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 EXOSC10Q01780 885 aaKnown RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 QRICH1Q2TAL8 776 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 MUM1L1Q5H9M0 696 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 RNF207Q6ZRF8 634 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 SGMS1Q86VZ5 419 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 HOMER1Q86YM7 354 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 MYL10Q9BUA6 226 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 RIOX1Q9H6W3 641 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 JMJD4Q9H9V9 463 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 SENP2Q9HC62 589 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 A1CFQ9NQ94 594 aaKnown RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 RBM28Q9NW13 759 aaKnown RBP9.07□□□□□ -0.96
MACF1-220ENST00000485063 SMCHD1A6NHR9 2005 aa9.07□□□□□ -0.96
MACF1-220ENST00000485063 SYNGAP1Q96PV0 1343 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 FRMPD3Q5JV73 1810 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 CCDC196A0A1B0GTZ2 297 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 ZBTB43O43298 467 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 CYBAP13498 195 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 HOXB1P14653 301 aaPredicted RBP9.06□□□□□ -0.96
MACF1-220ENST00000485063 RPS6KB1P23443 525 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 CALML3P27482 149 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 BAATQ14032 418 aaPredicted RBP9.06□□□□□ -0.96
MACF1-220ENST00000485063 PPP2R5BQ15173 497 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 APOA5Q6Q788 366 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 MAMDC4Q6UXC1 1216 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 Q6ZUG5 572 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 RUFY3Q7L099 469 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 MICU3Q86XE3 530 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 CCDC144CPQ8IYA2 1237 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 ANKLE1Q8NAG6 615 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 FANCBQ8NB91 859 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 TCEANC2Q96MN5 208 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 SPZ1Q9BXG8 430 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 ABHD16BQ9H3Z7 469 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 GPHNQ9NQX3 736 aaPredicted RBP9.06□□□□□ -0.96
MACF1-220ENST00000485063 CYP39A1Q9NYL5 469 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 DDX20Q9UHI6 824 aaKnown RBP9.06□□□□□ -0.96
MACF1-220ENST00000485063 CYP46A1Q9Y6A2 500 aa9.06□□□□□ -0.96
MACF1-220ENST00000485063 LOC102724159A0A0B4J2E5 919 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 PNMA6FA0A0J9YX94 578 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 KLF18A0A0U1RQI7 1052 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 NFIBO00712 420 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 SEPT4O43236 478 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 AKR1A1P14550 325 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 RXRAP19793 462 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 RCAN1P53805 252 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 ANAPC15P60006 121 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 RPS6P62753 249 aaKnown RBP9.05□□□□□ -0.96
MACF1-220ENST00000485063 CNTN2Q02246 1040 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 PWP2Q15269 919 aaKnown RBP9.05□□□□□ -0.96
MACF1-220ENST00000485063 RTN1Q16799 776 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 PRAMEF19Q5SWL8 479 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 SAMD3Q8N6K7 520 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 FAM133AQ8N9E0 248 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 DNERQ8NFT8 737 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 BRF1Q92994 677 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 MTMR8Q96EF0 704 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 PIGSQ96S52 555 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 HTATIP2Q9BUP3 242 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 TM6SF1Q9BZW5 370 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
MACF1-220ENST00000485063 MAP3K20Q9NYL2 800 aaKnown RBP9.05□□□□□ -0.96
MACF1-220ENST00000485063 ZHX1Q9UKY1 873 aaPredicted RBP9.05□□□□□ -0.96
MACF1-220ENST00000485063 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 PCDHA1Q9Y5I3 950 aa9.05□□□□□ -0.96
MACF1-220ENST00000485063 MCM3APO60318 1980 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 POTEB3A0JP26 581 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 GOLGA8AA7E2F4 631 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 GOLGA8BA8MQT2 603 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 FARP2O94887 1054 aaPredicted RBP9.04□□□□□ -0.96
MACF1-220ENST00000485063 CFBP00751 764 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 RARBP10826 455 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 CPA1P15085 419 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 METAP2P50579 478 aaKnown RBP eCLIP9.04□□□□□ -0.96
MACF1-220ENST00000485063 ALDH5A1P51649 535 aaPredicted RBP9.04□□□□□ -0.96
MACF1-220ENST00000485063 ACVR2BQ13705 512 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 POTEBQ6S5H4 581 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 ARMCX2Q7L311 632 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 NECAB2Q7Z6G3 386 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 RAB11FIP4Q86YS3 637 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 FBXL16Q8N461 479 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 ARRDC4Q8NCT1 418 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 CLEC4DQ8WXI8 215 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 PIBF1Q8WXW3 757 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 CUL5Q93034 780 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms