RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 KCNA10Q16322 511 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 ZNF792Q3KQV3 632 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 BRICD5Q6PL45 260 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 ZNF365Q70YC5 407 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 RIOX2Q8IUF8 465 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 MSL3Q8N5Y2 521 aaKnown RBP10.28□□□□□ -0.76
DDX39B-221ENST00000484566 KLHDC9Q8NEP7 349 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 CD320Q9NPF0 282 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
DDX39B-221ENST00000484566 DBNLQ9UJU6 430 aaKnown RBP10.28□□□□□ -0.76
DDX39B-221ENST00000484566 MAGEB6P1A0A0J9YX57 407 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 DUSP11O75319 330 aaKnown RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 SURF6O75683 361 aaKnown RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 STAT3P40763 770 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 KIAA1755Q5JYT7 1200 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 HERVK_113Q902F9 699 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 RIOK1Q9BRS2 568 aaKnown RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 IL23AQ9NPF7 189 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 TLR7Q9NYK1 1049 aaKnown RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 TMX2Q9Y320 296 aa10.27□□□□□ -0.77
DDX39B-221ENST00000484566 PRRC2BQ5JSZ5 2229 aaKnown RBP10.27□□□□□ -0.77
DDX39B-221ENST00000484566 MCM3APO60318 1980 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 ARVCFO00192 962 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 ASGR1P07306 291 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 RARSP54136 660 aaKnown RBP10.26□□□□□ -0.77
DDX39B-221ENST00000484566 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
DDX39B-221ENST00000484566 CLEC10AQ8IUN9 316 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 FAM126BQ8IXS8 530 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 CCDC8Q9H0W5 538 aaPredicted RBP10.26□□□□□ -0.77
DDX39B-221ENST00000484566 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 PPP1R9AQ9ULJ8 1098 aa10.26□□□□□ -0.77
DDX39B-221ENST00000484566 RIF1Q5UIP0 2472 aaKnown RBP10.26□□□□□ -0.77
DDX39B-221ENST00000484566 VWA5AO00534 786 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 RAD21O60216 631 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 FGBP02675 491 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 AKR1B1P15121 316 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 NDUFV2P19404 249 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 CDK7P50613 346 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 TTF1Q15361 905 aaPredicted RBP10.25□□□□□ -0.77
DDX39B-221ENST00000484566 AMOTL1Q8IY63 956 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 CCDC17Q96LX7 622 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
DDX39B-221ENST00000484566 ANP32EQ9BTT0 268 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 TEX13BQ9BXU2 312 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 HIPK3Q9H422 1215 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 ANTXR1Q9H6X2 564 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 FBXO28Q9NVF7 368 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 ZNF214Q9UL59 606 aaPredicted RBP10.25□□□□□ -0.77
DDX39B-221ENST00000484566 ADAMTS5Q9UNA0 930 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 YBX2Q9Y2T7 364 aaKnown RBP10.25□□□□□ -0.77
DDX39B-221ENST00000484566 MYO15AQ9UKN7 3530 aa10.25□□□□□ -0.77
DDX39B-221ENST00000484566 ZBBXA8MT70 800 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 GFRA3O60609 400 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 SNAI1O95863 264 aaPredicted RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 TRIM27P14373 513 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 CYP2C18P33260 490 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 ACVR2BQ13705 512 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 SNRNP48Q6IEG0 339 aaKnown RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 MAMDC4Q6UXC1 1216 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 TRMT2AQ8IZ69 625 aaKnown RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 SSH3Q8TE77 659 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 SDR42E1Q8WUS8 393 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 FRAT1Q92837 279 aaPredicted RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 UPF3AQ9H1J1 476 aaKnown RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 DCP1AQ9NPI6 582 aaPredicted RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 CTDP1Q9Y5B0 961 aaPredicted RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 PCDHA11Q9Y5I1 949 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 SLC4A7Q9Y6M7 1214 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 BAZ2AQ9UIF9 1905 aaKnown RBP10.24□□□□□ -0.77
DDX39B-221ENST00000484566 FAM186AA6NE01 2351 aa10.24□□□□□ -0.77
DDX39B-221ENST00000484566 BRWD1Q9NSI6 2320 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 S1PR4O95977 384 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 CYP2D6P10635 497 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 PDE6AP16499 860 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 GJA9P57773 515 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 FAM83BQ5T0W9 1011 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 SLC9C2Q5TAH2 1124 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 RPUSD2Q8IZ73 545 aaKnown RBP10.23□□□□□ -0.77
DDX39B-221ENST00000484566 REPS2Q8NFH8 660 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 HLA-CQ95604 372 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 CLUAP1Q96AJ1 413 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 EAF2Q96CJ1 260 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-221ENST00000484566 DYNLL2Q96FJ2 89 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 SLF1Q9BQI6 1058 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 KANSL2Q9H9L4 492 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 COG5Q9UP83 839 aa10.23□□□□□ -0.77
DDX39B-221ENST00000484566 SPTLC1O15269 473 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms