RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 CDK7P50613 346 aa29.09■■■□□ 2.25
LYSMD4-207ENST00000484050 SEC23AQ15436 765 aa29.09■■■□□ 2.25
LYSMD4-207ENST00000484050 IFIT1BQ5T764 474 aaKnown RBP29.09■■■□□ 2.25
LYSMD4-207ENST00000484050 KIAA1211Q6ZU35 1233 aa29.09■■■□□ 2.25
LYSMD4-207ENST00000484050 LOC102724159A0A0B4J2E5 919 aa29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 DYNC1LI2O43237 492 aaPredicted RBP29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 PWP2Q15269 919 aaKnown RBP29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 SHHQ15465 462 aa29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 FSCN1Q16658 493 aaKnown RBP29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 C9orf50Q5SZB4 431 aa29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 AP5M1Q9H0R1 490 aa29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 TAF6LQ9Y6J9 622 aa29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 U3KPZ7 1027 aaPredicted RBP29.08■■■□□ 2.25
LYSMD4-207ENST00000484050 A0A0U1RQG5 324 aaPredicted RBP29.07■■■□□ 2.24
LYSMD4-207ENST00000484050 RAG1P15918 1043 aa29.07■■■□□ 2.24
LYSMD4-207ENST00000484050 Q7L0L9 218 aa29.07■■■□□ 2.24
LYSMD4-207ENST00000484050 MROH7Q68CQ1 1323 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 ARVCFO00192 962 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 TRDNQ13061 729 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 CXCL17Q6UXB2 119 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 STAG2Q8N3U4 1231 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 DEFB123Q8N688 67 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 JMJD4Q9H9V9 463 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 Q9Y3F1 56 aa29.06■■■□□ 2.24
LYSMD4-207ENST00000484050 DHX16O60231 1041 aaKnown RBP29.05■■■□□ 2.24
LYSMD4-207ENST00000484050 QRICH1Q2TAL8 776 aa29.05■■■□□ 2.24
LYSMD4-207ENST00000484050 RGS22Q8NE09 1264 aa29.05■■■□□ 2.24
LYSMD4-207ENST00000484050 DNERQ8NFT8 737 aa29.05■■■□□ 2.24
LYSMD4-207ENST00000484050 VAT1LQ9HCJ6 419 aa29.05■■■□□ 2.24
LYSMD4-207ENST00000484050 ABCB11O95342 1321 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 EDNRBP24530 442 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 PDE4DQ08499 809 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 DUSP28Q4G0W2 176 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 TBC1D5Q92609 795 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 WDR11Q9BZH6 1224 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 TBX21Q9UL17 535 aa29.04■■■□□ 2.24
LYSMD4-207ENST00000484050 RBM47A0AV96 593 aaKnown RBP29.03■■■□□ 2.24
LYSMD4-207ENST00000484050 EPHB4P54760 987 aa29.03■■■□□ 2.24
LYSMD4-207ENST00000484050 LAMA2P24043 3122 aaKnown RBP29.03■■■□□ 2.24
LYSMD4-207ENST00000484050 E7EWF7 191 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 CABYRO75952 493 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 STOX1Q6ZVD7 989 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 FBXO11Q86XK2 927 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 FAM126BQ8IXS8 530 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 MAP4K1Q92918 833 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 MPHOSPH6Q99547 160 aaKnown RBP29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 MAD2L2Q9UI95 211 aa29.02■■■□□ 2.24
LYSMD4-207ENST00000484050 KLRF2D3W0D1 207 aa29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 IFIT3O14879 490 aaKnown RBP29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 ZEB2O60315 1214 aa29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 FPGSQ05932 587 aa29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 RALYLQ86SE5 291 aaKnown RBP29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 SLC43A3Q8NBI5 491 aa29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 NCOA7Q8NI08 942 aa29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 SENP2Q9HC62 589 aa29.01■■■□□ 2.23
LYSMD4-207ENST00000484050 TIMP1P01033 207 aa29■■■□□ 2.23
LYSMD4-207ENST00000484050 MAF1Q9H063 256 aa29■■■□□ 2.23
LYSMD4-207ENST00000484050 COL20A1Q9P218 1284 aa29■■■□□ 2.23
LYSMD4-207ENST00000484050 RBM8AQ9Y5S9 174 aaKnown RBP29■■■□□ 2.23
LYSMD4-207ENST00000484050 GRIN2DO15399 1336 aa28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 PALM3A6NDB9 673 aaPredicted RBP28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 ITGA7Q13683 1181 aa28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 CHST3Q7LGC8 479 aa28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 SYTL5Q8TDW5 730 aaPredicted RBP28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 TAAR1Q96RJ0 339 aa28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 MTMR10Q9NXD2 777 aa28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 MRPL11Q9Y3B7 192 aaKnown RBP28.99■■■□□ 2.23
LYSMD4-207ENST00000484050 ERICH2A1L162 156 aa28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 TLR3O15455 904 aaKnown RBP28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 CD4P01730 458 aa28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 PSMC6P62333 389 aa28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 MCF2L2Q86YR7 1114 aa28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 SCFD2Q8WU76 684 aa28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 KIAA1217Q5T5P2 1943 aa28.98■■■□□ 2.23
LYSMD4-207ENST00000484050 B4DLN1 442 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 MRPL12P52815 198 aaKnown RBP28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 ANTXR2P58335 489 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 GRM4Q14833 912 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 PPP2R5BQ15173 497 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 SLC35G1Q2M3R5 365 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 OR6J1Q8NGC5 347 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 MTMR8Q96EF0 704 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 AMNQ9BXJ7 453 aa28.97■■■□□ 2.23
LYSMD4-207ENST00000484050 PPP1R11O60927 126 aaPredicted RBP28.96■■■□□ 2.23
LYSMD4-207ENST00000484050 WTAPQ15007 396 aa28.96■■■□□ 2.23
LYSMD4-207ENST00000484050 MFSD5Q6N075 450 aa28.96■■■□□ 2.23
LYSMD4-207ENST00000484050 MB21D2Q8IYB1 491 aaPredicted RBP28.96■■■□□ 2.23
LYSMD4-207ENST00000484050 COPS5Q92905 334 aa28.96■■■□□ 2.23
LYSMD4-207ENST00000484050 PPP1R12CQ9BZL4 782 aa28.96■■■□□ 2.23
LYSMD4-207ENST00000484050 OPLAHO14841 1288 aa28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 ZBTB5O15062 677 aa28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 NKRFO15226 690 aaKnown RBP eCLIP28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 CPT1AP50416 773 aa28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 SART3Q15020 963 aaKnown RBP28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 FAM109BQ6ICB4 259 aaPredicted RBP28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 SKAP1Q86WV1 359 aa28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 NSUN6Q8TEA1 469 aaKnown RBP28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 RNPC3Q96LT9 517 aaKnown RBP28.95■■■□□ 2.22
LYSMD4-207ENST00000484050 BAZ2BQ9UIF8 2168 aaKnown RBP28.94■■■□□ 2.22
LYSMD4-207ENST00000484050 ARIH2O95376 493 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms