RNA–Protein interactions for RNA: ENST00000483954.1

ATXN1-207, Transcript of ataxin 1, humanhuman

TSL 3

Gene ATXN1, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-207ENST00000483954 TTC21AQ8NDW8 1320 aa6.18□□□□□ -1.42
ATXN1-207ENST00000483954 USP42Q9H9J4 1324 aaKnown RBP6.18□□□□□ -1.42
ATXN1-207ENST00000483954 SRGAP3O43295 1099 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 DHX16O60231 1041 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 WISP1O95388 367 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 DLGAP3O95886 979 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 APBA3O96018 575 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 LMNB1P20700 586 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 GARTP22102 1010 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 SFPQP23246 707 aaKnown RBP eCLIP6.17□□□□□ -1.426e-7■■□□□ 13.3
ATXN1-207ENST00000483954 EIF4A3P38919 411 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 AMPHP49418 695 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 RBM6P78332 1123 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 G3BP1Q13283 466 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 CAMK2GQ13555 558 aaPredicted RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 EIF4A2Q14240 407 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 SF3A1Q15459 793 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 TERF2Q15554 542 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 ATP2B3Q16720 1220 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 KIF4BQ2VIQ3 1234 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 MAP1SQ66K74 1059 aaPredicted RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 SHISA2Q6UWI4 295 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 CWC27Q6UX04 472 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 NME9Q86XW9 330 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 LRRC8AQ8IWT6 810 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 ERCC4Q92889 916 aaPredicted RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 KCNB2Q92953 911 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 TTC14Q96N46 770 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 FAM107BQ9H098 131 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 RNF208Q9H0X6 261 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 MIR1-1HGQ9H1L0 117 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 CCDC86Q9H6F5 360 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 SUGCTQ9HAC7 445 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 DACT1Q9NYF0 836 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 PALD1Q9ULE6 856 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 PYCARDQ9ULZ3 195 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
ATXN1-207ENST00000483954 MRVI1Q9Y6F6 885 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 SALL3Q9BXA9 1300 aa6.17□□□□□ -1.42
ATXN1-207ENST00000483954 MON2Q7Z3U7 1717 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 CHD2O14647 1828 aaKnown RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 FAM83GA6ND36 823 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 F8W735 103 aaPredicted RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ZNF862O60290 1169 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 GREM1O60565 184 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ERLIN1O75477 346 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ALDH1L1O75891 902 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 PF4P02776 101 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 IVLP07476 585 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 LTKP29376 864 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 TUBB2AQ13885 445 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 DCTN1Q14203 1278 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 TAF7Q15545 349 aaPredicted RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 NAA16Q6N069 864 aaPredicted RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 Q6ZS46 218 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ACAD11Q709F0 780 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 MCM10Q7L590 875 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 JMYQ8N9B5 988 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 SMG8Q8ND04 991 aaKnown RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 GAL3ST3Q96A11 431 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 SDF4Q9BRK5 362 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 TUBB2BQ9BVA1 445 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 RUSC1Q9BVN2 902 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 LSG1Q9H089 658 aaKnown RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 GBP3Q9H0R5 595 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ADAMTS1Q9UHI8 967 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 PCDHB5Q9Y5E4 795 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 PCDHGB7Q9Y5F8 929 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 SBNO1A3KN83 1393 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 METP08581 1390 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 FLT4P35916 1363 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ROBO2Q9HCK4 1378 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 ADAMTS13Q76LX8 1427 aa6.16□□□□□ -1.42
ATXN1-207ENST00000483954 CCDC69A6NI79 296 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 MINDY4BA8MYZ0 360 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 ADGRE1Q14246 886 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 CAMK4Q16566 473 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 FBXL19Q6PCT2 694 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 OLFM4Q6UX06 510 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 LEKR1Q6ZMV7 388 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 RBM43Q6ZSC3 357 aaKnown RBP6.15□□□□□ -1.42
ATXN1-207ENST00000483954 PPP1R42Q7Z4L9 355 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 LUZP1Q86V48 1076 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 CCAR2Q8N163 923 aaKnown RBP6.15□□□□□ -1.42
ATXN1-207ENST00000483954 GPBAR1Q8TDU6 330 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 ZNF296Q8WUU4 475 aaPredicted RBP6.15□□□□□ -1.42
ATXN1-207ENST00000483954 LEO1Q8WVC0 666 aaPredicted RBP6.15□□□□□ -1.42
ATXN1-207ENST00000483954 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 BPIFA3Q9BQP9 254 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 FSD1Q9BTV5 496 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 KCNF1Q9H3M0 494 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 AKTIPQ9H8T0 292 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 CYP4F12Q9HCS2 524 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 IL1RAPL2Q9NP60 686 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 PCDHGC5Q9Y5F6 944 aa6.15□□□□□ -1.42
ATXN1-207ENST00000483954 PHLPP2Q6ZVD8 1323 aa6.15□□□□□ -1.43
ATXN1-207ENST00000483954 N4BP2Q86UW6 1770 aaPredicted RBP6.15□□□□□ -1.43
ATXN1-207ENST00000483954 RFX7Q2KHR2 1363 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms