RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SRBD1Q8N5C6 995 aaKnown RBP20.88■□□□□ 0.93
HDAC6-225ENST00000483506 SAMD3Q8N6K7 520 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 TM6SF1Q9BZW5 370 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 BRPF3Q9ULD4 1205 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 FAM184BQ9ULE4 1060 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 PCDHA1Q9Y5I3 950 aa20.88■□□□□ 0.93
HDAC6-225ENST00000483506 NID2Q14112 1375 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 DNM1LO00429 736 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 EIF5BO60841 1220 aaKnown RBP20.87■□□□□ 0.93
HDAC6-225ENST00000483506 RARBP10826 455 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 CPA1P15085 419 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 EDNRBP24530 442 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 CALML3P27482 149 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 SYNE3Q6ZMZ3 975 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 MICU3Q86XE3 530 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 HOMER1Q86YM7 354 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 SYTL5Q8TDW5 730 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-225ENST00000483506 HTATIP2Q9BUP3 242 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 ZSWIM6Q9HCJ5 1215 aa20.87■□□□□ 0.93
HDAC6-225ENST00000483506 RBM28Q9NW13 759 aaKnown RBP20.87■□□□□ 0.93
HDAC6-225ENST00000483506 MAP3K20Q9NYL2 800 aaKnown RBP20.87■□□□□ 0.93
HDAC6-225ENST00000483506 ZHX1Q9UKY1 873 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-225ENST00000483506 ALPK3Q96L96 1907 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
HDAC6-225ENST00000483506 HSD17B4P51659 736 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 Q6ZUG5 572 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 ARRDC4Q8NCT1 418 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 TBC1D5Q92609 795 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 RRP36Q96EU6 259 aaKnown RBP20.86■□□□□ 0.93
HDAC6-225ENST00000483506 C11orf49Q9H6J7 331 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 VTA1Q9NP79 307 aa20.86■□□□□ 0.93
HDAC6-225ENST00000483506 ZBTB43O43298 467 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 CCDC144BQ3MJ40 725 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 ANO1Q5XXA6 986 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 RUFY3Q7L099 469 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 IL17RAQ96F46 866 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 XPNPEP3Q9NQH7 507 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 COL20A1Q9P218 1284 aa20.85■□□□□ 0.93
HDAC6-225ENST00000483506 KLF18A0A0U1RQI7 1052 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 ADCY6O43306 1168 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 DUSP11O75319 330 aaKnown RBP20.84■□□□□ 0.93
HDAC6-225ENST00000483506 EVCP57679 992 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 ANAPC15P60006 121 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 NKX3-2P78367 333 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 FUT2Q10981 343 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 PPP2R5BQ15173 497 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 LRRC41Q15345 812 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 RTN1Q16799 776 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 TAPT1Q6NXT6 567 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 RAB11FIP4Q86YS3 637 aa20.84■□□□□ 0.93
HDAC6-225ENST00000483506 MPHOSPH6Q99547 160 aaKnown RBP20.84■□□□□ 0.93
HDAC6-225ENST00000483506 DDX49Q9Y6V7 483 aaKnown RBP20.84■□□□□ 0.93
HDAC6-225ENST00000483506 ADAMTS4O75173 837 aa20.83■□□□□ 0.93
HDAC6-225ENST00000483506 FGD1P98174 961 aa20.83■□□□□ 0.93
HDAC6-225ENST00000483506 BRF1Q92994 677 aa20.83■□□□□ 0.93
HDAC6-225ENST00000483506 LENG1Q96BZ8 264 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-225ENST00000483506 UPF3AQ9H1J1 476 aaKnown RBP20.83■□□□□ 0.93
HDAC6-225ENST00000483506 FAM217BQ9NTX9 383 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-225ENST00000483506 SEC63Q9UGP8 760 aaKnown RBP20.83■□□□□ 0.93
HDAC6-225ENST00000483506 CNTNAP5Q8WYK1 1306 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 SYNRGQ9UMZ2 1314 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 CEP290O15078 2479 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 RBM47A0AV96 593 aaKnown RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 GOLGA8AA7E2F4 631 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 GOLGA8BA8MQT2 603 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 B4DLN1 442 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 CST5P28325 142 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 MRPL12P52815 198 aaKnown RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 GJC2Q5T442 439 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 FBXO16Q8IX29 292 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 NSUN6Q8TEA1 469 aaKnown RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 GNEQ9Y223 722 aaKnown RBP20.82■□□□□ 0.92
HDAC6-225ENST00000483506 CYP46A1Q9Y6A2 500 aa20.82■□□□□ 0.92
HDAC6-225ENST00000483506 CFBP00751 764 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 GJA9P57773 515 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 APOBRQ0VD83 1088 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 PRPF38BQ5VTL8 546 aaKnown RBP20.81■□□□□ 0.92
HDAC6-225ENST00000483506 IQSEC1Q6DN90 963 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 RNF180Q86T96 592 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 KLHDC9Q8NEP7 349 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 TAAR1Q96RJ0 339 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 IWS1Q96ST2 819 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 RMDN3Q96TC7 470 aa20.81■□□□□ 0.92
HDAC6-225ENST00000483506 DNAH12Q6ZR08 3092 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-225ENST00000483506 KBTBD13C9JR72 458 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 PGK1P00558 417 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 CDC27P30260 824 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 METAP2P50579 478 aaKnown RBP eCLIP20.8■□□□□ 0.92
HDAC6-225ENST00000483506 TNFAIP2Q03169 654 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 PDE4DQ08499 809 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 TOB2Q14106 344 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-225ENST00000483506 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-225ENST00000483506 PIBF1Q8WXW3 757 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 TSEN34Q9BSV6 310 aaKnown RBP20.8■□□□□ 0.92
HDAC6-225ENST00000483506 PDGFCQ9NRA1 345 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 PHF24Q9UPV7 400 aa20.8■□□□□ 0.92
HDAC6-225ENST00000483506 Q9Y3F1 56 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms