RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 ALPK3Q96L96 1907 aa15.53■□□□□ 0.08
SSR1-208ENST00000483409 ASB14A6NK59 587 aa15.52■□□□□ 0.08
SSR1-208ENST00000483409 MSCO60682 206 aa15.52■□□□□ 0.08
SSR1-208ENST00000483409 ZNF865P0CJ78 1059 aaPredicted RBP15.52■□□□□ 0.08
SSR1-208ENST00000483409 ALDH5A1P51649 535 aaPredicted RBP15.52■□□□□ 0.08
SSR1-208ENST00000483409 DIS3LQ8TF46 1054 aaKnown RBP15.52■□□□□ 0.08
SSR1-208ENST00000483409 LENG1Q96BZ8 264 aaPredicted RBP15.52■□□□□ 0.08
SSR1-208ENST00000483409 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
SSR1-208ENST00000483409 SEC63Q9UGP8 760 aaKnown RBP15.52■□□□□ 0.08
SSR1-208ENST00000483409 hCG_1642624A0A1W2PR95 340 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 SMARCA1P28370 1054 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 ACVR2BQ13705 512 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 C8orf34Q49A92 452 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 UBE2Q1Q7Z7E8 422 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 MCF2L2Q86YR7 1114 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 RGS22Q8NE09 1264 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 ABHD16BQ9H3Z7 469 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
SSR1-208ENST00000483409 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 ADD3Q9UEY8 706 aaKnown RBP15.51■□□□□ 0.07
SSR1-208ENST00000483409 KIAA1217Q5T5P2 1943 aa15.51■□□□□ 0.07
SSR1-208ENST00000483409 CNTNAP5Q8WYK1 1306 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 OPLAHO14841 1288 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 EIF5BO60841 1220 aaKnown RBP15.5■□□□□ 0.07
SSR1-208ENST00000483409 CFBP00751 764 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 AKR1A1P14550 325 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 CAPN2P17655 700 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 CDC27P30260 824 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
SSR1-208ENST00000483409 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
SSR1-208ENST00000483409 EEPD1Q7L9B9 569 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 FBXO16Q8IX29 292 aaPredicted RBP15.5■□□□□ 0.07
SSR1-208ENST00000483409 FBXL16Q8N461 479 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 ANKLE1Q8NAG6 615 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 SYTL5Q8TDW5 730 aaPredicted RBP15.5■□□□□ 0.07
SSR1-208ENST00000483409 PAWRQ96IZ0 340 aaKnown RBP15.5■□□□□ 0.07
SSR1-208ENST00000483409 AGXT2Q9BYV1 514 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 KATNBL1Q9H079 304 aa15.5■□□□□ 0.07
SSR1-208ENST00000483409 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
SSR1-208ENST00000483409 RARBP10826 455 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
SSR1-208ENST00000483409 RCAN1P53805 252 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 ANAPC15P60006 121 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 TRAF1Q13077 416 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 TOB2Q14106 344 aaPredicted RBP15.49■□□□□ 0.07
SSR1-208ENST00000483409 CCDC144BQ3MJ40 725 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 LARP6Q9BRS8 491 aaKnown RBP15.49■□□□□ 0.07
SSR1-208ENST00000483409 FAM217BQ9NTX9 383 aaPredicted RBP15.49■□□□□ 0.07
SSR1-208ENST00000483409 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 FAM184BQ9ULE4 1060 aa15.49■□□□□ 0.07
SSR1-208ENST00000483409 ADCY6O43306 1168 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 NECAB2Q7Z6G3 386 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 DNERQ8NFT8 737 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 MORC4Q8TE76 937 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 TAAR1Q96RJ0 339 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 XPNPEP3Q9NQH7 507 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 NID2Q14112 1375 aa15.48■□□□□ 0.07
SSR1-208ENST00000483409 PGK1P00558 417 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 ADD1P35611 737 aaKnown RBP15.47■□□□□ 0.07
SSR1-208ENST00000483409 HSD17B4P51659 736 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 PDE4DQ08499 809 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 FUT2Q10981 343 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 GJC2Q5T442 439 aaPredicted RBP15.47■□□□□ 0.07
SSR1-208ENST00000483409 HEATR3Q7Z4Q2 680 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.072e-15■□□□□ 9.4
SSR1-208ENST00000483409 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 MPHOSPH6Q99547 160 aaKnown RBP15.47■□□□□ 0.07
SSR1-208ENST00000483409 MAF1Q9H063 256 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 C11orf49Q9H6J7 331 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
SSR1-208ENST00000483409 LOC102724159A0A0B4J2E5 919 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 CCDC196A0A1B0GTZ2 297 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 GCOM1H8Y6P7 765 aaPredicted RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 DNM1LO00429 736 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 POLR2MP0CAP2 368 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 EIF2AK2P19525 551 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 EDNRBP24530 442 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 PDIA3P30101 505 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 ADCYAP1R1P41586 468 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 CCT2P78371 535 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 GHRHRQ02643 423 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 PWP2Q15269 919 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 ARHGEF16Q5VV41 709 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 NOL8Q76FK4 1167 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 FCHSD1Q86WN1 690 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 ARRDC4Q8NCT1 418 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 NSUN6Q8TEA1 469 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 NCOA5Q9HCD5 579 aaKnown RBP15.46■□□□□ 0.07
SSR1-208ENST00000483409 VTA1Q9NP79 307 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 PXMP2Q9NR77 195 aa15.46■□□□□ 0.07
SSR1-208ENST00000483409 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
SSR1-208ENST00000483409 MYH7BA7E2Y1 1941 aa15.45■□□□□ 0.06
SSR1-208ENST00000483409 B4DLN1 442 aa15.45■□□□□ 0.06
SSR1-208ENST00000483409 KBTBD13C9JR72 458 aa15.45■□□□□ 0.06
SSR1-208ENST00000483409 DUSP11O75319 330 aaKnown RBP15.45■□□□□ 0.06
SSR1-208ENST00000483409 PTGS1P23219 599 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms