RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PMS1P54277 932 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 ERVK-21P61565 698 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 FAAP100Q0VG06 881 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 AP3B2Q13367 1082 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 TERF2Q15554 542 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 ZYXQ15942 572 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 CYB5RLQ6IPT4 315 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 DARS2Q6PI48 645 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 CCDC149Q6ZUS6 474 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 OTOP3Q7RTS5 596 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 GOLGA1Q92805 767 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 OSBP2Q969R2 916 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 NXPE3Q969Y0 559 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 GAL3ST3Q96A11 431 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 SGCZQ96LD1 299 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 TSPAN18Q96SJ8 248 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 SLC9A7Q96T83 725 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 SEC62Q99442 399 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 REV1Q9UBZ9 1251 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 DDX20Q9UHI6 824 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 ISY1Q9ULR0 285 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 TMEM98Q9Y2Y6 226 aa6.04□□□□□ -1.44
R3HDM1-216ENST00000483065 SPATA31C2B4DYI2 1134 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 RASA4BC9J798 803 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 FAM227AF5H4B4 570 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 M0R2C6 588 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 GOLIM4O00461 696 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 RASA4O43374 803 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 MMP20O60882 483 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 SASH3O75995 380 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 B3GALT4O96024 378 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 ACRP10323 421 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 KRT9P35527 623 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 ID4P47928 161 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 CACNB3P54284 484 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 PCBP2Q15366 365 aaKnown RBP eCLIP6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 DGKKQ5KSL6 1271 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 C1QTNF12Q5T7M4 302 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 RC3H1Q5TC82 1133 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 RETSATQ6NUM9 610 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 IGF2-ASQ6U949 168 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 C1orf122Q6ZSJ8 110 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 Q6ZVU0 165 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 ZNF227Q86WZ6 799 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 SMC1BQ8NDV3 1235 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 USP13Q92995 863 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 CNTNAP3BQ96NU0 1288 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 ZIC5Q96T25 663 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 CRB3Q9BUF7 120 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 CNTNAP3Q9BZ76 1288 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 SH3GLB2Q9NR46 395 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 SAMD15Q9P1V8 674 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 GJD2Q9UKL4 321 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 KCNH4Q9UQ05 1017 aa6.03□□□□□ -1.44
R3HDM1-216ENST00000483065 A0A1B0GTH6 734 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 ITGAVP06756 1048 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 RNF144AP50876 292 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 KPNA1P52294 538 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 USP14P54578 494 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 KCNQ4P56696 695 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 ICA1Q05084 483 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 PSMD6Q15008 389 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 TAF12Q16514 161 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 GJC2Q5T442 439 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 VPS53Q5VIR6 699 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 RFX8Q6ZV50 586 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 FGD2Q7Z6J4 655 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 ADAT2Q7Z6V5 191 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 SLC41A1Q8IVJ1 513 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 MIER2Q8N344 545 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 KIAA1958Q8N8K9 716 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 ATRIPQ8WXE1 791 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 BSNDQ8WZ55 320 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 ACSBG1Q96GR2 724 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 HHIPQ96QV1 700 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 TAAR9Q96RI9 348 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 MAP3K14Q99558 947 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 AP1M1Q9BXS5 423 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 SLC26A6Q9BXS9 759 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 WDR12Q9GZL7 423 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 NUP62CLQ9H1M0 184 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 TOMM22Q9NS69 142 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 SMC4Q9NTJ3 1288 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 SAGE1Q9NXZ1 904 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 TLR7Q9NYK1 1049 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 TLL2Q9Y6L7 1015 aa6.02□□□□□ -1.45
R3HDM1-216ENST00000483065 NCAM2O15394 837 aa6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 MGEA5O60502 916 aa6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 DDX58O95786 925 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 BAG2O95816 211 aa6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 IFIT1P09914 478 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 C6orf222P0C671 652 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 ELF1P32519 619 aa6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 ADCYAP1R1P41586 468 aa6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 ECE1P42892 770 aa6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 YARSP54577 528 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-216ENST00000483065 SKOR1P84550 965 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms