RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 MCF2L2Q86YR7 1114 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
SNX4-205ENST00000482965 FBXL16Q8N461 479 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 SRBD1Q8N5C6 995 aaKnown RBP10.16□□□□□ -0.78
SNX4-205ENST00000482965 TRPV1Q8NER1 839 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 FGD4Q96M96 766 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 PDRG1Q9NUG6 133 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 NRBP1Q9UHY1 535 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 CNPY2Q9Y2B0 182 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 PCDHA1Q9Y5I3 950 aa10.16□□□□□ -0.78
SNX4-205ENST00000482965 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 ASB14A6NK59 587 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 MSCO60682 206 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 CAPN2P17655 700 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 RGS19P49795 217 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 RPS6P62753 249 aaKnown RBP10.15□□□□□ -0.78
SNX4-205ENST00000482965 MAMDC4Q6UXC1 1216 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 ARMCX2Q7L311 632 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 RGS22Q8NE09 1264 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 SHISA4Q96DD7 197 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.78
SNX4-205ENST00000482965 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 MAF1Q9H063 256 aa10.15□□□□□ -0.78
SNX4-205ENST00000482965 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
SNX4-205ENST00000482965 ADD3Q9UEY8 706 aaKnown RBP10.15□□□□□ -0.78
SNX4-205ENST00000482965 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
SNX4-205ENST00000482965 ZHX1Q9UKY1 873 aaPredicted RBP10.15□□□□□ -0.78
SNX4-205ENST00000482965 CNTNAP5Q8WYK1 1306 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 LRRC37A2A6NM11 1700 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 hCG_1642624A0A1W2PR95 340 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 SEPT4O43236 478 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 SNAI1O95863 264 aaPredicted RBP10.14□□□□□ -0.79
SNX4-205ENST00000482965 CFBP00751 764 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 CDC27P30260 824 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
SNX4-205ENST00000482965 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
SNX4-205ENST00000482965 PPP2R5BQ15173 497 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 TBC1D5Q92609 795 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 MPHOSPH6Q99547 160 aaKnown RBP10.14□□□□□ -0.79
SNX4-205ENST00000482965 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 NID2Q14112 1375 aa10.14□□□□□ -0.79
SNX4-205ENST00000482965 ASTN1O14525 1302 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 LOC102724159A0A0B4J2E5 919 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 B4DLN1 442 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 FARP2O94887 1054 aaPredicted RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 ZNF865P0CJ78 1059 aaPredicted RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 AKR1A1P14550 325 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 MRPL12P52815 198 aaKnown RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 MLLT1Q03111 559 aaPredicted RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 PWP2Q15269 919 aaKnown RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 ANO1Q5XXA6 986 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 LHX8Q68G74 356 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 SAMD3Q8N6K7 520 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 DNERQ8NFT8 737 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 SYTL5Q8TDW5 730 aaPredicted RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 LARP6Q9BRS8 491 aaKnown RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 ABHD16BQ9H3Z7 469 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
SNX4-205ENST00000482965 OGDHLQ9ULD0 1010 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 FAM184BQ9ULE4 1060 aa10.13□□□□□ -0.79
SNX4-205ENST00000482965 PDE4DIPQ5VU43 2346 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 KIAA1217Q5T5P2 1943 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 GCOM1H8Y6P7 765 aaPredicted RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 OPLAHO14841 1288 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 POLR2MP0CAP2 368 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 RARBP10826 455 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 HOXA13P31271 388 aaPredicted RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 HSD17B4P51659 736 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 EVCP57679 992 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 PDE4DQ08499 809 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 FUT2Q10981 343 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 EEPD1Q7L9B9 569 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 HEATR3Q7Z4Q2 680 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 FBXO16Q8IX29 292 aaPredicted RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 MORC4Q8TE76 937 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 CUL5Q93034 780 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 IL17RAQ96F46 866 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 ZNF274Q96GC6 653 aaPredicted RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 TAAR1Q96RJ0 339 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 RMDN3Q96TC7 470 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 UPF2Q9HAU5 1272 aaKnown RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 COL20A1Q9P218 1284 aa10.12□□□□□ -0.79
SNX4-205ENST00000482965 DDX49Q9Y6V7 483 aaKnown RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 V9GY48 417 aaPredicted RBP10.12□□□□□ -0.79
SNX4-205ENST00000482965 CENPFP49454 3210 aa10.11□□□□□ -0.79
SNX4-205ENST00000482965 EIF2AK2P19525 551 aaKnown RBP10.11□□□□□ -0.79
SNX4-205ENST00000482965 NEK4P51957 841 aa10.11□□□□□ -0.79
SNX4-205ENST00000482965 AKAP17AQ02040 695 aaKnown RBP10.11□□□□□ -0.79
SNX4-205ENST00000482965 GHRHRQ02643 423 aa10.11□□□□□ -0.79
SNX4-205ENST00000482965 STK3Q13188 491 aa10.11□□□□□ -0.79
SNX4-205ENST00000482965 CCDC144BQ3MJ40 725 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms