RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 FBXL16Q8N461 479 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 DPF3Q92784 378 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 LRRC2Q9BYS8 371 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 VTA1Q9NP79 307 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 KBTBD13C9JR72 458 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 PPP1R11O60927 126 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-213ENST00000482910 EDNRBP24530 442 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 CALML3P27482 149 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 LRRC41Q15345 812 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 CCDC144BQ3MJ40 725 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 APOA5Q6Q788 366 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 SYNE3Q6ZMZ3 975 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 RNF180Q86T96 592 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 PIGSQ96S52 555 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 USP26Q9BXU7 913 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 PCDHA1Q9Y5I3 950 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 NR2E3Q9Y5X4 410 aa17.53■□□□□ 0.4
COL16A1-213ENST00000482910 CEP290O15078 2479 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.4
COL16A1-213ENST00000482910 ADAMTS4O75173 837 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 PSMA5P28066 241 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 NKX3-2P78367 333 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 FANCBQ8NB91 859 aa17.52■□□□□ 0.4
COL16A1-213ENST00000482910 SYTL5Q8TDW5 730 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-213ENST00000482910 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
COL16A1-213ENST00000482910 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
COL16A1-213ENST00000482910 TSEN34Q9BSV6 310 aaKnown RBP17.52■□□□□ 0.4
COL16A1-213ENST00000482910 OPLAHO14841 1288 aa17.51■□□□□ 0.39
COL16A1-213ENST00000482910 EVI5O60447 810 aa17.51■□□□□ 0.39
COL16A1-213ENST00000482910 CST5P28325 142 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-213ENST00000482910 HSD17B4P51659 736 aa17.51■□□□□ 0.39
COL16A1-213ENST00000482910 GJC2Q5T442 439 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-213ENST00000482910 IQSEC1Q6DN90 963 aa17.51■□□□□ 0.39
COL16A1-213ENST00000482910 KLHDC9Q8NEP7 349 aa17.51■□□□□ 0.39
COL16A1-213ENST00000482910 RRP36Q96EU6 259 aaKnown RBP17.51■□□□□ 0.39
COL16A1-213ENST00000482910 UPF3AQ9H1J1 476 aaKnown RBP17.51■□□□□ 0.39
COL16A1-213ENST00000482910 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
COL16A1-213ENST00000482910 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
COL16A1-213ENST00000482910 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 PGK1P00558 417 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 GJA9P57773 515 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 TNFAIP2Q03169 654 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 TAPT1Q6NXT6 567 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 TMTC3Q6ZXV5 915 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 SRBD1Q8N5C6 995 aaKnown RBP17.5■□□□□ 0.39
COL16A1-213ENST00000482910 NSUN6Q8TEA1 469 aaKnown RBP17.5■□□□□ 0.39
COL16A1-213ENST00000482910 TBC1D5Q92609 795 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 TCEANC2Q96MN5 208 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 IWS1Q96ST2 819 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 AGXT2Q9BYV1 514 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 SENP6Q9GZR1 1112 aaPredicted RBP17.5■□□□□ 0.39
COL16A1-213ENST00000482910 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 Q9Y3F1 56 aa17.5■□□□□ 0.39
COL16A1-213ENST00000482910 RBM47A0AV96 593 aaKnown RBP17.49■□□□□ 0.39
COL16A1-213ENST00000482910 ZBTB43O43298 467 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 ADCY6O43306 1168 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 CFBP00751 764 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 RXRAP19793 462 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 RPS6KB1P23443 525 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 PDE4DQ08499 809 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 FBXO16Q8IX29 292 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-213ENST00000482910 LENG1Q96BZ8 264 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-213ENST00000482910 TM6SF1Q9BZW5 370 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 COL20A1Q9P218 1284 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 SEC63Q9UGP8 760 aaKnown RBP17.49■□□□□ 0.39
COL16A1-213ENST00000482910 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
COL16A1-213ENST00000482910 GNEQ9Y223 722 aaKnown RBP17.49■□□□□ 0.39
COL16A1-213ENST00000482910 MOXD2PA6NHM9 499 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 H0YGN5 161 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 ADCYAP1R1P41586 468 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 FGD1P98174 961 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 SNX17Q15036 470 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 C1orf53Q5VUE5 145 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 CCSAPQ6IQ19 270 aaPredicted RBP17.48■□□□□ 0.39
COL16A1-213ENST00000482910 PCSK9Q8NBP7 692 aaKnown RBP17.48■□□□□ 0.39
COL16A1-213ENST00000482910 TAAR1Q96RJ0 339 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 RMDN3Q96TC7 470 aa17.48■□□□□ 0.39
COL16A1-213ENST00000482910 KLF18A0A0U1RQI7 1052 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.47■□□□□ 0.39
COL16A1-213ENST00000482910 GCOM1H8Y6P7 765 aaPredicted RBP17.47■□□□□ 0.39
COL16A1-213ENST00000482910 POLR2MP0CAP2 368 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
COL16A1-213ENST00000482910 RTN1Q16799 776 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 Q6ZUG5 572 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 EEPD1Q7L9B9 569 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 ZSWIM6Q9HCJ5 1215 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
COL16A1-213ENST00000482910 NID2Q14112 1375 aa17.47■□□□□ 0.39
COL16A1-213ENST00000482910 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
COL16A1-213ENST00000482910 NKRFO15226 690 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL16A1-213ENST00000482910 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms