RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 PRKAG3Q9UGI9 489 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 RB1CC1Q8TDY2 1594 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 UNC13AQ9UPW8 1703 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 DBHP09172 617 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 CDR1P51861 262 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 C6orf15Q6UXA7 325 aaPredicted RBP5.88□□□□□ -1.47
GTF3A-207ENST00000482655 LDHDQ86WU2 507 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 LZTR1Q8N653 840 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 NLGN2Q8NFZ4 835 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 EMC9Q9Y3B6 208 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 R3HCC1Q9Y3T6 440 aaKnown RBP5.88□□□□□ -1.47
GTF3A-207ENST00000482655 ARID1BQ8NFD5 2236 aaPredicted RBP5.88□□□□□ -1.47
GTF3A-207ENST00000482655 BICRAQ9NZM4 1560 aa5.88□□□□□ -1.47
GTF3A-207ENST00000482655 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 F8W031 263 aaPredicted RBP5.87□□□□□ -1.47
GTF3A-207ENST00000482655 DDAH1O94760 285 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 PFKLP17858 780 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 DNAJA1P31689 397 aaKnown RBP5.87□□□□□ -1.47
GTF3A-207ENST00000482655 ZNF200P98182 395 aaPredicted RBP5.87□□□□□ -1.47
GTF3A-207ENST00000482655 SCRN1Q12765 414 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 FXNQ16595 210 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 SV2CQ496J9 727 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 FAM178BQ8IXR5 827 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 USP33Q8TEY7 942 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 TINF2Q9BSI4 451 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 RWDD3Q9Y3V2 267 aa5.87□□□□□ -1.47
GTF3A-207ENST00000482655 NPHS1O60500 1241 aa5.86□□□□□ -1.47
GTF3A-207ENST00000482655 TARBP2Q15633 366 aaKnown RBP5.86□□□□□ -1.47
GTF3A-207ENST00000482655 TRIM59Q8IWR1 403 aa5.86□□□□□ -1.47
GTF3A-207ENST00000482655 ZNF513Q8N8E2 541 aaPredicted RBP5.86□□□□□ -1.47
GTF3A-207ENST00000482655 GULP1Q9UBP9 304 aa5.86□□□□□ -1.47
GTF3A-207ENST00000482655 NUDT5Q9UKK9 219 aa5.86□□□□□ -1.47
GTF3A-207ENST00000482655 B2RBV5 119 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-207ENST00000482655 BUB1BO60566 1050 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-207ENST00000482655 FGRP09769 529 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 PLS3P13797 630 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 ETFBP38117 255 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 AFF3P51826 1226 aaKnown RBP5.85□□□□□ -1.47
GTF3A-207ENST00000482655 NCKAP1LP55160 1127 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 GTF2IRD2BQ6EKJ0 949 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 CNKSR3Q6P9H4 555 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 GTF2IRD2Q86UP8 949 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 IGDCC3Q8IVU1 814 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 ZNF408Q9H9D4 720 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 CLEC1BQ9P126 229 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 PCDHA5Q9Y5H7 936 aa5.85□□□□□ -1.47
GTF3A-207ENST00000482655 ZC3H12DA2A288 527 aaKnown RBP5.84□□□□□ -1.47
GTF3A-207ENST00000482655 SUSD5O60279 629 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 GLI4P10075 376 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 PRR5P85299 388 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 MCF2L2Q86YR7 1114 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 NETO2Q8NC67 525 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 PANK1Q8TE04 598 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 COPS5Q92905 334 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 PEX11GQ96HA9 241 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 NKX2-4Q9H2Z4 354 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 GPRC5CQ9NQ84 441 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 CYP26B1Q9NR63 512 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 FAN1Q9Y2M0 1017 aa5.84□□□□□ -1.47
GTF3A-207ENST00000482655 AGRPO00253 132 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 THBDP07204 575 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 BMP7P18075 431 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 WWC2Q6AWC2 1192 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 EEPD1Q7L9B9 569 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 ZNF227Q86WZ6 799 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 NLGN1Q8N2Q7 840 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 BTN2A2Q8WVV5 523 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 ALG3Q92685 438 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 MRGPRX3Q96LB0 322 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 PWWP2AQ96N64 755 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 LGR4Q9BXB1 951 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 RNF38Q9H0F5 515 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 ZCCHC4Q9H5U6 513 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.83□□□□□ -1.48
GTF3A-207ENST00000482655 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
GTF3A-207ENST00000482655 C7orf72A4D263 438 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 FUCA1P04066 466 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 ITGAVP06756 1048 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 SNRPB2P08579 225 aaKnown RBP5.82□□□□□ -1.48
GTF3A-207ENST00000482655 INHBBP09529 407 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 IQCEQ6IPM2 695 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 FAM129CQ86XR2 697 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 TMEFF1Q8IYR6 380 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 DACT3Q96B18 629 aaPredicted RBP5.82□□□□□ -1.48
GTF3A-207ENST00000482655 MMP19Q99542 508 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 RXFP1Q9HBX9 757 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 BTG4Q9NY30 223 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 MARCH2Q9P0N8 246 aa5.82□□□□□ -1.48
GTF3A-207ENST00000482655 MYO1BO43795 1136 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 NCAM1P13591 858 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 ECI1P42126 302 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 KCNJ6P48051 423 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 LIMS1P48059 325 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 SLC9A5Q14940 896 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 SLC43A3Q8NBI5 491 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 MTA3Q9BTC8 594 aa5.81□□□□□ -1.48
GTF3A-207ENST00000482655 EPN3Q9H201 632 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms