RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
EXOSC3-205ENST00000482614 PALM3A6NDB9 673 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 ASGR1P07306 291 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 IRX5P78411 483 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 MCF2L2Q86YR7 1114 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 PDGFCQ9NRA1 345 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 MAD2L2Q9UI95 211 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 Q9Y3F1 56 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 ELP1O95163 1332 aa17.88■□□□□ 0.45
EXOSC3-205ENST00000482614 CTAGE5O15320 804 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 SMPD1P17405 629 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 PDE4DQ08499 809 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 GRM4Q14833 912 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 TMEM67Q5HYA8 995 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 CHST3Q7LGC8 479 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 TLK2Q86UE8 772 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 MB21D2Q8IYB1 491 aaPredicted RBP17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 VTI1AQ96AJ9 217 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 AMNQ9BXJ7 453 aa17.87■□□□□ 0.45
EXOSC3-205ENST00000482614 DNAH12Q6ZR08 3092 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 RBM47A0AV96 593 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 DYNC1LI2O43237 492 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 ZEB2O60315 1214 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 CLTBP09497 229 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 ANTXR2P58335 489 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 ANKRD33Q7Z3H0 272 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 CATIPQ7Z7H3 387 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 SKAP1Q86WV1 359 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 MTMR8Q96EF0 704 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 TOX2Q96NM4 488 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
EXOSC3-205ENST00000482614 DCDC2CA8MYV0 355 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 SLC27A2O14975 620 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 ZBTB5O15062 677 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 PQBP1O60828 265 aaKnown RBP17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 EDNRBP24530 442 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 BEX3Q00994 111 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 TROAPQ12815 778 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 TRAF1Q13077 416 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 LTBP2Q14767 1821 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 NECTIN1Q15223 517 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 FSCN1Q16658 493 aaKnown RBP17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 DUSP28Q4G0W2 176 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 MROH7Q68CQ1 1323 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 TBC1D5Q92609 795 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 WDR11Q9BZH6 1224 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 RIOX1Q9H6W3 641 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 SENP2Q9HC62 589 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
EXOSC3-205ENST00000482614 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 CABYRO75952 493 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 MCM5P33992 734 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 CDK7P50613 346 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 CREB3L3Q68CJ9 461 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 SH3RF1Q7Z6J0 888 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 TMTC2Q8N394 836 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 TRIM43Q96BQ3 446 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 TMEM87BQ96K49 555 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 TMEM39AQ9NV64 488 aa17.84■□□□□ 0.45
EXOSC3-205ENST00000482614 ARVCFO00192 962 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 KIAA0355O15063 1070 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 NKRFO15226 690 aaKnown RBP eCLIP17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 PRC1O43663 620 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 FAAP100Q0VG06 881 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 TMEM63BQ5T3F8 832 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 NSUN6Q8TEA1 469 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 SCFD2Q8WU76 684 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 BADQ92934 168 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 TAAR1Q96RJ0 339 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 IWS1Q96ST2 819 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 MAP3K14Q99558 947 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 LY9Q9HBG7 655 aa17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 MAP3K20Q9NYL2 800 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 RANBP2P49792 3224 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-205ENST00000482614 SOX1O00570 391 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 CDC45O75419 566 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 DDAH1O94760 285 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 CFBP00751 764 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 RAG1P15918 1043 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 CXCL17Q6UXB2 119 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 HOMER1Q86YM7 354 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 SAMD3Q8N6K7 520 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 PIGSQ96S52 555 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 RMDN3Q96TC7 470 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 SEZ6LQ9BYH1 1024 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 PCDHA1Q9Y5I3 950 aa17.82■□□□□ 0.44
EXOSC3-205ENST00000482614 PNMA6FA0A0J9YX94 578 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 TLR3O15455 904 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 PTGS1P23219 599 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms