RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 GRM4Q14833 912 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 GNASQ5JWF2 1037 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 CATIPQ7Z7H3 387 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 MB21D2Q8IYB1 491 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-212ENST00000482478 TDHQ8IZJ6 230 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 KLHDC9Q8NEP7 349 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 JMJD4Q9H9V9 463 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 LAMA3Q16787 3333 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 LOC102724159A0A0B4J2E5 919 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 CDC45O75419 566 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 ASGR1P07306 291 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 SMPD1P17405 629 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 BMP8BP34820 402 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 ANTXR2P58335 489 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 TLE2Q04725 743 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 PWP2Q15269 919 aaKnown RBP18.25■□□□□ 0.51
COL16A1-212ENST00000482478 FSCN1Q16658 493 aaKnown RBP18.25■□□□□ 0.51
COL16A1-212ENST00000482478 C1orf53Q5VUE5 145 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 NFXL1Q6ZNB6 911 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 MCF2L2Q86YR7 1114 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 SENP2Q9HC62 589 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 MAD2L2Q9UI95 211 aa18.25■□□□□ 0.51
COL16A1-212ENST00000482478 MRPL11Q9Y3B7 192 aaKnown RBP18.25■□□□□ 0.51
COL16A1-212ENST00000482478 MROH7Q68CQ1 1323 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 A0A0U1RQG5 324 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-212ENST00000482478 B4DLN1 442 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 SLC27A2O14975 620 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 PRC1O43663 620 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 PTGS1P23219 599 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 MRPL12P52815 198 aaKnown RBP18.24■□□□□ 0.51
COL16A1-212ENST00000482478 PPP2R5BQ15173 497 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 DNERQ8NFT8 737 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 MORC4Q8TE76 937 aa18.24■□□□□ 0.51
COL16A1-212ENST00000482478 ZBTB5O15062 677 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 ZEB2O60315 1214 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 DDAH1O94760 285 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 RNF20Q5VTR2 975 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 CREB3L3Q68CJ9 461 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 CCSAPQ6IQ19 270 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-212ENST00000482478 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-212ENST00000482478 MYL10Q9BUA6 226 aa18.23■□□□□ 0.51
COL16A1-212ENST00000482478 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
COL16A1-212ENST00000482478 PALM3A6NDB9 673 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-212ENST00000482478 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 DCDC2CA8MYV0 355 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 DYNC1LI2O43237 492 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-212ENST00000482478 CFBP00751 764 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 MCM5P33992 734 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 CXCL17Q6UXB2 119 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 SH3RF1Q7Z6J0 888 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 ZNF654Q8IZM8 581 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 OR6J1Q8NGC5 347 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 PIBF1Q8WXW3 757 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 WDR11Q9BZH6 1224 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 LY9Q9HBG7 655 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 ELP1O95163 1332 aa18.22■□□□□ 0.51
COL16A1-212ENST00000482478 SOX1O00570 391 aaPredicted RBP18.21■□□□□ 0.51
COL16A1-212ENST00000482478 SH2B2O14492 632 aaPredicted RBP18.21■□□□□ 0.51
COL16A1-212ENST00000482478 EDNRBP24530 442 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 DUSP28Q4G0W2 176 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 SYTL5Q8TDW5 730 aaPredicted RBP18.21■□□□□ 0.51
COL16A1-212ENST00000482478 SCFD2Q8WU76 684 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 BADQ92934 168 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 LRCH3Q96II8 777 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 PIGSQ96S52 555 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 TMEM39AQ9NV64 488 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 PCDHA1Q9Y5I3 950 aa18.21■□□□□ 0.51
COL16A1-212ENST00000482478 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 CTAGE5O15320 804 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 RAG1P15918 1043 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 EIF2AK2P19525 551 aaKnown RBP18.2■□□□□ 0.5
COL16A1-212ENST00000482478 KIF5BP33176 963 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 CPT1AP50416 773 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 TROAPQ12815 778 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 ARHGEF16Q5VV41 709 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
COL16A1-212ENST00000482478 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-212ENST00000482478 RMDN3Q96TC7 470 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-212ENST00000482478 COL20A1Q9P218 1284 aa18.2■□□□□ 0.5
COL16A1-212ENST00000482478 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
COL16A1-212ENST00000482478 TLR3O15455 904 aaKnown RBP18.19■□□□□ 0.5
COL16A1-212ENST00000482478 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-212ENST00000482478 CABYRO75952 493 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 TRAF1Q13077 416 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 TTLL4Q14679 1199 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 BRDTQ58F21 947 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-212ENST00000482478 TMEM63BQ5T3F8 832 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 DNAH12Q6ZR08 3092 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 ANKRD33Q7Z3H0 272 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 LRRC2Q9BYS8 371 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 MAF1Q9H063 256 aa18.19■□□□□ 0.5
COL16A1-212ENST00000482478 Q9Y3F1 56 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms