RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 BAATQ14032 418 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-208ENST00000482310 RNF207Q6ZRF8 634 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 WASF1Q92558 559 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 GABRQQ9UN88 632 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
HDAC1-208ENST00000482310 TRIM17Q9Y577 477 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 DOCK5Q9H7D0 1870 aa15.22■□□□□ 0.03
HDAC1-208ENST00000482310 ADAMTS3O15072 1205 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 CYP2B6P20813 491 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 PTPREP23469 700 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 ADCY7P51828 1080 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 RPS6P62753 249 aaKnown RBP15.21■□□□□ 0.03
HDAC1-208ENST00000482310 PRKCZQ05513 592 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 TRAF1Q13077 416 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 TRIM29Q14134 588 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 USP17L6PQ6QN14 398 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 FCHSD1Q86WN1 690 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 CCDC148Q8NFR7 591 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 CUL5Q93034 780 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 PGBD1Q96JS3 809 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.03
HDAC1-208ENST00000482310 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
HDAC1-208ENST00000482310 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-208ENST00000482310 hCG_1984214I3L0E3 225 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 POLR2MP0CAP2 368 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 UBXN2AP68543 259 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 CNTN2Q02246 1040 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 GRB14Q14449 540 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 PPP1R18Q6NYC8 613 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 DPP9Q86TI2 863 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 MCF2L2Q86YR7 1114 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 ZNF713Q8N859 430 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-208ENST00000482310 RASGRP4Q8TDF6 673 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 CCDC12Q8WUD4 166 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-208ENST00000482310 C8orf76Q96K31 380 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 CYP39A1Q9NYL5 469 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 COL20A1Q9P218 1284 aa15.2■□□□□ 0.02
HDAC1-208ENST00000482310 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-208ENST00000482310 PFASO15067 1338 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 SLC15A5A6NIM6 579 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 COBLO75128 1261 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 XBP1P17861 261 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 FLT3LGP49771 235 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 SOX10P56693 466 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 MORN1Q5T089 497 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 C6orf50Q9HD87 102 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 CENPFP49454 3210 aa15.19■□□□□ 0.02
HDAC1-208ENST00000482310 VPS37CA5D8V6 355 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-208ENST00000482310 MAP2K5Q13163 448 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 CCL14Q16627 93 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 NOM1Q5C9Z4 860 aaKnown RBP15.18■□□□□ 0.02
HDAC1-208ENST00000482310 KRT40Q6A162 431 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 OTOP1Q7RTM1 612 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 SYTL5Q8TDW5 730 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-208ENST00000482310 SOCS4Q8WXH5 440 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 TAAR1Q96RJ0 339 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 RIC8AQ9NPQ8 531 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-208ENST00000482310 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 HTTP42858 3142 aa15.18■□□□□ 0.02
HDAC1-208ENST00000482310 H3BQV1 296 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 MEIS2O14770 477 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 STRNO43815 780 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
HDAC1-208ENST00000482310 HOXD10P28358 340 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 RGS2P41220 211 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 HSD17B4P51659 736 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 MRPL12P52815 198 aaKnown RBP15.17■□□□□ 0.02
HDAC1-208ENST00000482310 ARHGEF6Q15052 776 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 LARP1BQ659C4 914 aaKnown RBP15.17■□□□□ 0.02
HDAC1-208ENST00000482310 MCTP1Q6DN14 999 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 RAET1EQ8TD07 263 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 INTS4Q96HW7 963 aaKnown RBP15.17■□□□□ 0.02
HDAC1-208ENST00000482310 PHF20Q9BVI0 1012 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 ZMYND12Q9H0C1 365 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 SRRDQ9UH36 339 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 GJD2Q9UKL4 321 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 PCDHA4Q9UN74 947 aa15.17■□□□□ 0.02
HDAC1-208ENST00000482310 FRMPD3Q5JV73 1810 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 SOWAHBA6NEL2 793 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 ELNP15502 786 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 GNA11P29992 359 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 KRT2P35908 639 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
HDAC1-208ENST00000482310 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-208ENST00000482310 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 BLIDQ8IZY5 108 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 ABRAQ8N0Z2 381 aa15.16■□□□□ 0.02
HDAC1-208ENST00000482310 REXO1Q8N1G1 1221 aaKnown RBP15.16■□□□□ 0.02
HDAC1-208ENST00000482310 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-208ENST00000482310 ZFP91Q96JP5 570 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms