RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 PIGSQ96S52 555 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 MPHOSPH6Q99547 160 aaKnown RBP21.75■■□□□ 1.07
HSPG2-210ENST00000481644 VTA1Q9NP79 307 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 PHF24Q9UPV7 400 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.74■■□□□ 1.07
HSPG2-210ENST00000481644 CYTH3O43739 400 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 PPP1R11O60927 126 aaPredicted RBP21.74■■□□□ 1.07
HSPG2-210ENST00000481644 TNFAIP2Q03169 654 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 ADCK5Q3MIX3 580 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 NOL8Q76FK4 1167 aaKnown RBP21.74■■□□□ 1.07
HSPG2-210ENST00000481644 TBC1D5Q92609 795 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 SPC25Q9HBM1 224 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 CEP290O15078 2479 aa21.74■■□□□ 1.07
HSPG2-210ENST00000481644 C6orf222P0C671 652 aaPredicted RBP21.73■■□□□ 1.07
HSPG2-210ENST00000481644 CALM1P0DP23 149 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 CALM2P0DP24 149 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 CALM3P0DP25 149 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 PDE4DQ08499 809 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 TRAF1Q13077 416 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 TAPT1Q6NXT6 567 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 SLC39A5Q6ZMH5 540 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 DHX32Q7L7V1 743 aaKnown RBP21.73■■□□□ 1.07
HSPG2-210ENST00000481644 TSEN34Q9BSV6 310 aaKnown RBP21.73■■□□□ 1.07
HSPG2-210ENST00000481644 UPF3AQ9H1J1 476 aaKnown RBP21.73■■□□□ 1.07
HSPG2-210ENST00000481644 PDGFCQ9NRA1 345 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 ZMYND8Q9ULU4 1186 aaPredicted RBP21.73■■□□□ 1.07
HSPG2-210ENST00000481644 SLC12A7Q9Y666 1083 aa21.73■■□□□ 1.07
HSPG2-210ENST00000481644 PNMA6FA0A0J9YX94 578 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 MYADML2A6NDP7 307 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 B4DLN1 442 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 GNAQP50148 359 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 MRPL12P52815 198 aaKnown RBP21.72■■□□□ 1.07
HSPG2-210ENST00000481644 GJA9P57773 515 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 RTP1P59025 263 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 IQSEC1Q6DN90 963 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 CHRDL2Q6WN34 429 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 KLHDC9Q8NEP7 349 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 SYTL5Q8TDW5 730 aaPredicted RBP21.72■■□□□ 1.07
HSPG2-210ENST00000481644 PIBF1Q8WXW3 757 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 TCEANC2Q96MN5 208 aa21.72■■□□□ 1.07
HSPG2-210ENST00000481644 COLQQ9Y215 455 aaPredicted RBP21.72■■□□□ 1.07
HSPG2-210ENST00000481644 A0A1W2PQ45 241 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-210ENST00000481644 A0A1W2PQY0 241 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 CFBP00751 764 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 HMGB1P09429 215 aaKnown RBP21.71■■□□□ 1.07
HSPG2-210ENST00000481644 SYN1P17600 705 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 RXRAP19793 462 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 EDNRBP24530 442 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 CST5P28325 142 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-210ENST00000481644 HSPA4P34932 840 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 EXOSC10Q01780 885 aaKnown RBP21.71■■□□□ 1.07
HSPG2-210ENST00000481644 KCNA10Q16322 511 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 TLK2Q86UE8 772 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 SGMS1Q86VZ5 419 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 KCNB2Q92953 911 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 LZTS2Q9BRK4 669 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 SPZ1Q9BXG8 430 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 GNEQ9Y223 722 aaKnown RBP21.71■■□□□ 1.07
HSPG2-210ENST00000481644 ATP11BQ9Y2G3 1177 aa21.71■■□□□ 1.07
HSPG2-210ENST00000481644 MOXD2PA6NHM9 499 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 OPLAHO14841 1288 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 SMPD1P17405 629 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 ACLYP53396 1101 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 IRX5P78411 483 aaPredicted RBP21.7■■□□□ 1.06
HSPG2-210ENST00000481644 CCSAPQ6IQ19 270 aaPredicted RBP21.7■■□□□ 1.06
HSPG2-210ENST00000481644 SYNE3Q6ZMZ3 975 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 MICU3Q86XE3 530 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 RAB11FIP4Q86YS3 637 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 PCSK9Q8NBP7 692 aaKnown RBP21.7■■□□□ 1.06
HSPG2-210ENST00000481644 RRP36Q96EU6 259 aaKnown RBP21.7■■□□□ 1.06
HSPG2-210ENST00000481644 TAAR1Q96RJ0 339 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 COL20A1Q9P218 1284 aa21.7■■□□□ 1.06
HSPG2-210ENST00000481644 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 SMARCA1P28370 1054 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 HSD17B4P51659 736 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 SNX17Q15036 470 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 TRIM60Q495X7 471 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 GNASQ5JWF2 1037 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 NSUN6Q8TEA1 469 aaKnown RBP21.69■■□□□ 1.06
HSPG2-210ENST00000481644 JAKMIP1Q96N16 626 aaKnown RBP21.69■■□□□ 1.06
HSPG2-210ENST00000481644 RMDN3Q96TC7 470 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 AP5M1Q9H0R1 490 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 SNX14Q9Y5W7 946 aa21.69■■□□□ 1.06
HSPG2-210ENST00000481644 DYNC1LI2O43237 492 aaPredicted RBP21.68■■□□□ 1.06
HSPG2-210ENST00000481644 GHRHRQ02643 423 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 HABP4Q5JVS0 413 aaKnown RBP21.68■■□□□ 1.06
HSPG2-210ENST00000481644 C1orf53Q5VUE5 145 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 APOA5Q6Q788 366 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 SRBD1Q8N5C6 995 aaKnown RBP21.68■■□□□ 1.06
HSPG2-210ENST00000481644 SAMD3Q8N6K7 520 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 FANCBQ8NB91 859 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 WDR11Q9BZH6 1224 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 STARD7Q9NQZ5 370 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 MAP3K20Q9NYL2 800 aaKnown RBP21.68■■□□□ 1.06
HSPG2-210ENST00000481644 SEC63Q9UGP8 760 aaKnown RBP21.68■■□□□ 1.06
HSPG2-210ENST00000481644 Q9Y3F1 56 aa21.68■■□□□ 1.06
HSPG2-210ENST00000481644 RBM47A0AV96 593 aaKnown RBP21.67■■□□□ 1.06
HSPG2-210ENST00000481644 CTAGE5O15320 804 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 ASGR1P07306 291 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms