RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CCDC178Q5BJE1 867 aa21.74■■□□□ 1.07
CLK1-211ENST00000481641 ANKS1AQ92625 1134 aa21.74■■□□□ 1.07
CLK1-211ENST00000481641 WDR19Q8NEZ3 1342 aa21.74■■□□□ 1.07
CLK1-211ENST00000481641 TIMP1P01033 207 aa21.73■■□□□ 1.07
CLK1-211ENST00000481641 CDC37Q16543 378 aaPredicted RBP21.73■■□□□ 1.07
CLK1-211ENST00000481641 FAM126BQ8IXS8 530 aa21.73■■□□□ 1.07
CLK1-211ENST00000481641 TBC1D5Q92609 795 aa21.73■■□□□ 1.07
CLK1-211ENST00000481641 KRT23Q9C075 422 aa21.73■■□□□ 1.07
CLK1-211ENST00000481641 MROH7Q68CQ1 1323 aa21.73■■□□□ 1.07
CLK1-211ENST00000481641 PSMC6P62333 389 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 PTH1RQ03431 593 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 FAM109BQ6ICB4 259 aaPredicted RBP21.72■■□□□ 1.07
CLK1-211ENST00000481641 CYB5R4Q7L1T6 521 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 ADGRF4Q8IZF3 695 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 SLC17A8Q8NDX2 589 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 RNPC3Q96LT9 517 aaKnown RBP21.72■■□□□ 1.07
CLK1-211ENST00000481641 GUCD1Q96NT3 240 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 WDR11Q9BZH6 1224 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 PPP1R12CQ9BZL4 782 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 VAT1LQ9HCJ6 419 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 STXBP5LQ9Y2K9 1186 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 GRIN2DO15399 1336 aa21.72■■□□□ 1.07
CLK1-211ENST00000481641 ITGA7Q13683 1181 aa21.71■■□□□ 1.07
CLK1-211ENST00000481641 DUSP28Q4G0W2 176 aa21.71■■□□□ 1.07
CLK1-211ENST00000481641 PNMA2Q9UL42 364 aa21.71■■□□□ 1.07
CLK1-211ENST00000481641 Q9Y3F1 56 aa21.71■■□□□ 1.07
CLK1-211ENST00000481641 ZEB2O60315 1214 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 CHMLP26374 656 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 NT5C2P49902 561 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 PDE4DQ08499 809 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 ASPRV1Q53RT3 343 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 ZNF697Q5TEC3 545 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 MFSD5Q6N075 450 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 SLC43A3Q8NBI5 491 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 UBAC1Q9BSL1 405 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 CNNM2Q9H8M5 875 aa21.7■■□□□ 1.06
CLK1-211ENST00000481641 RBM47A0AV96 593 aaKnown RBP21.69■■□□□ 1.06
CLK1-211ENST00000481641 TLR3O15455 904 aaKnown RBP21.69■■□□□ 1.06
CLK1-211ENST00000481641 DHX16O60231 1041 aaKnown RBP21.69■■□□□ 1.06
CLK1-211ENST00000481641 CABYRO75952 493 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 CD4P01730 458 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 PARP1P09874 1014 aaKnown RBP21.69■■□□□ 1.06
CLK1-211ENST00000481641 QRICH1Q2TAL8 776 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 IFIT1BQ5T764 474 aaKnown RBP21.69■■□□□ 1.06
CLK1-211ENST00000481641 C16orf59Q7L2K0 433 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 STAG2Q8N3U4 1231 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 COPS5Q92905 334 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.69■■□□□ 1.061e-8■□□□□ 10.6
CLK1-211ENST00000481641 JMJD4Q9H9V9 463 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 TAF6LQ9Y6J9 622 aa21.69■■□□□ 1.06
CLK1-211ENST00000481641 LOC102724159A0A0B4J2E5 919 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 ACRP10323 421 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 CSF2RAP15509 400 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 EDNRBP24530 442 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 CYP2C18P33260 490 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 SMAD3P84022 425 aaKnown RBP21.68■■□□□ 1.06
CLK1-211ENST00000481641 PWP2Q15269 919 aaKnown RBP21.68■■□□□ 1.06
CLK1-211ENST00000481641 SEC23AQ15436 765 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 TRPV6Q9H1D0 765 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 COL20A1Q9P218 1284 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 RAD50Q92878 1312 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 MYH6P13533 1939 aa21.68■■□□□ 1.06
CLK1-211ENST00000481641 ABCB11O95342 1321 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 UMODL1Q5DID0 1318 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 CYP21A2P08686 494 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 RGS22Q8NE09 1264 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 DNERQ8NFT8 737 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 OR6J1Q8NGC5 347 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 TAAR1Q96RJ0 339 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 TTYH1Q9H313 450 aaPredicted RBP21.67■■□□□ 1.06
CLK1-211ENST00000481641 SEMA6BQ9H3T3 888 aa21.67■■□□□ 1.06
CLK1-211ENST00000481641 B4GALT4O60513 344 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 MYL3P08590 195 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 TMEM240Q5SV17 173 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 FBXO11Q86XK2 927 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 SYTL5Q8TDW5 730 aaPredicted RBP21.66■■□□□ 1.06
CLK1-211ENST00000481641 PPP1R13LQ8WUF5 828 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 RUFY2Q8WXA3 655 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 SENP2Q9HC62 589 aa21.66■■□□□ 1.06
CLK1-211ENST00000481641 ARIH2O95376 493 aa21.65■■□□□ 1.06
CLK1-211ENST00000481641 PPIGQ13427 754 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLK1-211ENST00000481641 PPP2R5BQ15173 497 aa21.65■■□□□ 1.06
CLK1-211ENST00000481641 TMEM199Q8N511 208 aa21.65■■□□□ 1.06
CLK1-211ENST00000481641 MPHOSPH6Q99547 160 aaKnown RBP21.65■■□□□ 1.06
CLK1-211ENST00000481641 MAD2L2Q9UI95 211 aa21.65■■□□□ 1.06
CLK1-211ENST00000481641 PURAQ00577 322 aaKnown RBP21.64■■□□□ 1.05
CLK1-211ENST00000481641 TRDNQ13061 729 aa21.64■■□□□ 1.05
CLK1-211ENST00000481641 ZNF365Q70YC5 407 aa21.64■■□□□ 1.05
CLK1-211ENST00000481641 CHST3Q7LGC8 479 aa21.64■■□□□ 1.05
CLK1-211ENST00000481641 SCFD2Q8WU76 684 aa21.64■■□□□ 1.05
CLK1-211ENST00000481641 CDX2Q99626 313 aaPredicted RBP21.64■■□□□ 1.05
CLK1-211ENST00000481641 HIPK3Q9H422 1215 aa21.64■■□□□ 1.05
CLK1-211ENST00000481641 U3KPZ7 1027 aaPredicted RBP21.64■■□□□ 1.05
CLK1-211ENST00000481641 KLRF2D3W0D1 207 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 SGSM2O43147 1006 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 PPP1R11O60927 126 aaPredicted RBP21.63■■□□□ 1.05
CLK1-211ENST00000481641 TXNP10599 105 aaKnown RBP21.63■■□□□ 1.05
CLK1-211ENST00000481641 CPT1AP50416 773 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 CCL23P55773 120 aa21.63■■□□□ 1.05
CLK1-211ENST00000481641 SLC35G1Q2M3R5 365 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms