RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 MRPL11Q9Y3B7 192 aaKnown RBP15.16■□□□□ 0.02
HDAC1-207ENST00000481281 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
HDAC1-207ENST00000481281 OPLAHO14841 1288 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 GJA9P57773 515 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 KRT32Q14532 448 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 MCF2L2Q86YR7 1114 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
HDAC1-207ENST00000481281 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
HDAC1-207ENST00000481281 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 TBC1D5Q92609 795 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 PIGSQ96S52 555 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 TSEN34Q9BSV6 310 aaKnown RBP15.15■□□□□ 0.02
HDAC1-207ENST00000481281 PRO3102Q9H379 93 aa15.15■□□□□ 0.02
HDAC1-207ENST00000481281 GNEQ9Y223 722 aaKnown RBP15.15■□□□□ 0.02
HDAC1-207ENST00000481281 MYADML2A6NDP7 307 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 CTAGE5O15320 804 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 REC8O95072 547 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 SMARCA1P28370 1054 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 KIF5BP33176 963 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 HSPA4P34932 840 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 ATN1P54259 1190 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-207ENST00000481281 EXOSC10Q01780 885 aaKnown RBP15.14■□□□□ 0.01
HDAC1-207ENST00000481281 TNFAIP2Q03169 654 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 C1orf53Q5VUE5 145 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 SLC39A5Q6ZMH5 540 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 NFXL1Q6ZNB6 911 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 SYTL5Q8TDW5 730 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-207ENST00000481281 SPZ1Q9BXG8 430 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 COL20A1Q9P218 1284 aa15.14■□□□□ 0.01
HDAC1-207ENST00000481281 COLQQ9Y215 455 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-207ENST00000481281 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 PNMA6FA0A0J9YX94 578 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 A0A1W2PQ45 241 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 A0A1W2PQY0 241 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 RBM47A0AV96 593 aaKnown RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 MOXD2PA6NHM9 499 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 C6orf222P0C671 652 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 CALM1P0DP23 149 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 CALM2P0DP24 149 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 CALM3P0DP25 149 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 SMPD1P17405 629 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 HSD17B4P51659 736 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 ACLYP53396 1101 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 RTP1P59025 263 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 TRAF1Q13077 416 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 IQSEC1Q6DN90 963 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 DHX32Q7L7V1 743 aaKnown RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 FERMT2Q96AC1 680 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 LZTS2Q9BRK4 669 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 SPC25Q9HBM1 224 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 ZMYND8Q9ULU4 1186 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-207ENST00000481281 PCDHA1Q9Y5I3 950 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 KIAA1217Q5T5P2 1943 aa15.13■□□□□ 0.01
HDAC1-207ENST00000481281 B4DLN1 442 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
HDAC1-207ENST00000481281 PLEKHA8P1O95397 391 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 GNAQP50148 359 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 MRPL12P52815 198 aaKnown RBP15.12■□□□□ 0.01
HDAC1-207ENST00000481281 PDE4DQ08499 809 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 KCNA10Q16322 511 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
HDAC1-207ENST00000481281 TLK2Q86UE8 772 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 SAMD3Q8N6K7 520 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 PCSK9Q8NBP7 692 aaKnown RBP15.12■□□□□ 0.01
HDAC1-207ENST00000481281 TCEANC2Q96MN5 208 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 TAAR1Q96RJ0 339 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 MAP3K20Q9NYL2 800 aaKnown RBP15.12■□□□□ 0.01
HDAC1-207ENST00000481281 Q9Y3F1 56 aa15.12■□□□□ 0.01
HDAC1-207ENST00000481281 CFBP00751 764 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
HDAC1-207ENST00000481281 SYN1P17600 705 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 RXRAP19793 462 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 TRIM60Q495X7 471 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 DUSP28Q4G0W2 176 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 TMEM63BQ5T3F8 832 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 APOA5Q6Q788 366 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 SRBD1Q8N5C6 995 aaKnown RBP15.11■□□□□ 0.01
HDAC1-207ENST00000481281 NSUN6Q8TEA1 469 aaKnown RBP15.11■□□□□ 0.01
HDAC1-207ENST00000481281 GDF15Q99988 308 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 SNX14Q9Y5W7 946 aa15.11■□□□□ 0.01
HDAC1-207ENST00000481281 TRIOBPQ9H2D6 2365 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 ASGR1P07306 291 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 PTGS1P23219 599 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 GNASQ5JWF2 1037 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
HDAC1-207ENST00000481281 MICU3Q86XE3 530 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 RAB11FIP4Q86YS3 637 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms