RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 HSPA8P11142 646 aaKnown RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 ZNF131P52739 623 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 LACTBP83111 547 aaPredicted RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 ITIH3Q06033 890 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 ARHGEF6Q15052 776 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 DUS1LQ6P1R4 473 aaKnown RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 TRIM50Q86XT4 487 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 PPP1R14CQ8TAE6 165 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 FBF1Q8TES7 1133 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 NEK1Q96PY6 1258 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 FADS3Q9Y5Q0 445 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 KIAA0232Q92628 1395 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 GBP1P32455 592 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 HPCAP84074 193 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 RESTQ13127 1097 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 PAK2Q13177 524 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 POLA2Q14181 598 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 CNPY1Q3B7I2 92 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 ZNF362Q5T0B9 420 aaPredicted RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 NCAPH2Q6IBW4 605 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 TBC1D1Q86TI0 1168 aaPredicted RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 IQCKQ8N0W5 287 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 ANKS4BQ8N8V4 417 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 DPF2Q92785 391 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 IQCDQ96DY2 449 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 GBP5Q96PP8 586 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 UIMC1Q96RL1 719 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 CTAGE1Q96RT6 745 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 SPATA16Q9BXB7 569 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 API5Q9BZZ5 524 aaKnown RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 CABP1Q9NZU7 370 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 SLC30A1Q9Y6M5 507 aa11.38□□□□□ -0.59
PRPF4B-206ENST00000481109 GNA14O95837 355 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 CTAG1AP78358 180 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 MYL5Q02045 173 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 MTX1Q13505 466 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 QPCTQ16769 361 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 ZFYVE27Q5T4F4 411 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 CYP26C1Q6V0L0 522 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 DAAM2Q86T65 1068 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 SCUBE1Q8IWY4 988 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 SPICE1Q8N0Z3 855 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 MREGQ8N565 214 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 SCAIQ8N9R8 606 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 ZIM3Q96PE6 472 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 GINM1Q9NU53 330 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 ADAM22Q9P0K1 906 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 ZNF180Q9UJW8 692 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 CHMP2BQ9UQN3 213 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 SSX2IPQ9Y2D8 614 aa11.37□□□□□ -0.59
PRPF4B-206ENST00000481109 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 CPA3P15088 417 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 RXRBP28702 533 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ALDH5A1P51649 535 aaPredicted RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ATP8B2P98198 1209 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 SAFBQ15424 915 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 SYDE2Q5VT97 1194 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 FMR1NBQ8N0W7 255 aaPredicted RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 CCDC197Q8NCU1 140 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 CCT7Q99832 543 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 PPANQ9NQ55 473 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 JADE2Q9NQC1 790 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ZMAT5Q9UDW3 170 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 SLC12A6Q9UHW9 1150 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 AOX1Q06278 1338 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 JCADQ9P266 1359 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 POGZQ7Z3K3 1410 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ERVK-7P63135 1459 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ABCC6O95255 1503 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 CD109Q6YHK3 1445 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 AFF2P51816 1311 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 PSMD14O00487 310 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 CYTH3O43739 400 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ENPP1P22413 925 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 FECHP22830 423 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.596e-6■■□□□ 12.4
PRPF4B-206ENST00000481109 PEX5P50542 639 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 TUBA1BP68363 451 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ADRM1Q16186 407 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 PDCD4Q53EL6 469 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 PAPD7Q5XG87 772 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 WDR75Q8IWA0 830 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 STK11IPQ8N1F8 1099 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 MMGT1Q8N4V1 131 aa11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 GFM2Q969S9 779 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-206ENST00000481109 LRRC45Q96CN5 670 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms