RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 RABEP1Q15276 862 aa17.49■□□□□ 0.39
ABCF3-213ENST00000480539 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
ABCF3-213ENST00000480539 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-213ENST00000480539 DIS3Q9Y2L1 958 aaKnown RBP17.49■□□□□ 0.39
ABCF3-213ENST00000480539 V9GY48 417 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-213ENST00000480539 CPLX1O14810 134 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 PFKFB2O60825 505 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 IGHA2P01877 340 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 SOX10P56693 466 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 TRAF1Q13077 416 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 NTRK3Q16288 839 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 MCF2L2Q86YR7 1114 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 TINF2Q9BSI4 451 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
ABCF3-213ENST00000480539 DTNBO60941 627 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 CAPN15O75808 1086 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 CYBAP13498 195 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 IFNAR1P17181 557 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 CCND3P30281 292 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-213ENST00000480539 HOXA13P31271 388 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-213ENST00000480539 ME3Q16798 604 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 MAP3K21Q5TCX8 1036 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 TRPV1Q8NER1 839 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.47■□□□□ 0.39
ABCF3-213ENST00000480539 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 COL20A1Q9P218 1284 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
ABCF3-213ENST00000480539 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-213ENST00000480539 HSD17B4P51659 736 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 NAPAP54920 295 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 AKAP17AQ02040 695 aaKnown RBP17.46■□□□□ 0.39
ABCF3-213ENST00000480539 PRAMEF19Q5SWL8 479 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 TYW1BQ6NUM6 668 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 ARMCX2Q7L311 632 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 ZNF467Q7Z7K2 595 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-213ENST00000480539 RGS22Q8NE09 1264 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-213ENST00000480539 GTF3C6Q969F1 213 aa17.46■□□□□ 0.39
ABCF3-213ENST00000480539 RNF26Q9BY78 433 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-213ENST00000480539 STXBP3O00186 592 aa17.45■□□□□ 0.38
ABCF3-213ENST00000480539 PRPF3O43395 683 aaKnown RBP17.45■□□□□ 0.38
ABCF3-213ENST00000480539 SCG2P13521 617 aa17.45■□□□□ 0.38
ABCF3-213ENST00000480539 PFKFB3Q16875 520 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-213ENST00000480539 CPLX2Q6PUV4 134 aaKnown RBP17.45■□□□□ 0.38
ABCF3-213ENST00000480539 MAMDC4Q6UXC1 1216 aa17.45■□□□□ 0.38
ABCF3-213ENST00000480539 HMX1Q9NP08 348 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-213ENST00000480539 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-213ENST00000480539 ZHX1Q9UKY1 873 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-213ENST00000480539 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
ABCF3-213ENST00000480539 RPTORQ8N122 1335 aa17.45■□□□□ 0.38
ABCF3-213ENST00000480539 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 ASB14A6NK59 587 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 hCG_1984214I3L0E3 225 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 ST18O60284 1047 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 SNAI1O95863 264 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 POLR2MP0CAP2 368 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 CNGA1P29973 690 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 GHRHRQ02643 423 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 SSRP1Q08945 709 aaKnown RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 ST3GAL1Q11201 340 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 PKN1Q16512 942 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 UBE2SQ16763 222 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 PPP1R18Q6NYC8 613 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 FBXO16Q8IX29 292 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 ZNF713Q8N859 430 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 TAAR1Q96RJ0 339 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 TMEM106CQ9BVX2 250 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 PAK6Q9NQU5 681 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 BARHL2Q9NY43 387 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
ABCF3-213ENST00000480539 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 MCM3APO60318 1980 aa17.44■□□□□ 0.38
ABCF3-213ENST00000480539 BRCA2P51587 3418 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 FRMPD3Q5JV73 1810 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 CDKL5O76039 1030 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
ABCF3-213ENST00000480539 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
ABCF3-213ENST00000480539 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 EEPD1Q7L9B9 569 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 FCHSD1Q86WN1 690 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 DNERQ8NFT8 737 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 CUL5Q93034 780 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 DEFB118Q96PH6 123 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 MAF1Q9H063 256 aa17.43■□□□□ 0.38
ABCF3-213ENST00000480539 CTDNEP1O95476 244 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 ANO1Q5XXA6 986 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 CCDC83Q8IWF9 413 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 LENG1Q96BZ8 264 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-213ENST00000480539 RMDN3Q96TC7 470 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 PSTPIP2Q9H939 334 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 PXMP2Q9NR77 195 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
ABCF3-213ENST00000480539 MEIS2O14770 477 aa17.41■□□□□ 0.38
ABCF3-213ENST00000480539 DEXIO95424 95 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms