RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 NEDD9Q14511 834 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
CPS1-207ENST00000479988 KRT40Q6A162 431 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MIS18BP1Q6P0N0 1132 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 DEPTORQ8TB45 409 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 USP28Q96RU2 1077 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 PUS7LQ9H0K6 701 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 CYP2D7A0A087X1C5 515 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 NFKBIEO00221 500 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 RRP9O43818 475 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 SFPQP23246 707 aaKnown RBP eCLIP6.66□□□□□ -1.34
CPS1-207ENST00000479988 MCM7P33993 719 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 CAP2P40123 477 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 TNNT3P45378 269 aaPredicted RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 PRMT2P55345 433 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 APOA5Q6Q788 366 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 PCSK9Q8NBP7 692 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 TIGD1Q96MW7 591 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MYL10Q9BUA6 226 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 DNAJC25Q9H1X3 360 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 LUC7LQ9NQ29 371 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 AKT3Q9Y243 479 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 DYNC1I1O14576 645 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 CCNT1O60563 726 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 IFNAR1P17181 557 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MAP2K2P36507 400 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 SMC1AQ14683 1233 aaKnown RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 GNASQ5JWF2 1037 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 GALNT17Q6IS24 598 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MB21D2Q8IYB1 491 aaPredicted RBP6.66□□□□□ -1.34
CPS1-207ENST00000479988 FANCBQ8NB91 859 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 SLC7A3Q8WY07 619 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 EXOC7Q9UPT5 735 aa6.66□□□□□ -1.34
CPS1-207ENST00000479988 MYPNQ86TC9 1320 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 AK9Q5TCS8 1911 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 SH2B2O14492 632 aaPredicted RBP6.65□□□□□ -1.34
CPS1-207ENST00000479988 PPP6R2O75170 966 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 NAP1L1P55209 391 aaKnown RBP6.65□□□□□ -1.34
CPS1-207ENST00000479988 BACE1P56817 501 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 EVCP57679 992 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 PRR16Q569H4 304 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 C3orf67Q6ZVT6 689 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 TSKSQ9UJT2 592 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 STK36Q9NRP7 1315 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 POLGP54098 1239 aaPredicted RBP6.65□□□□□ -1.34
CPS1-207ENST00000479988 YARSP54577 528 aaKnown RBP6.65□□□□□ -1.34
CPS1-207ENST00000479988 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.34
CPS1-207ENST00000479988 SGMS1Q86VZ5 419 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 CCDC112Q8NEF3 446 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 CHST13Q8NET6 341 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 SMARCE1Q969G3 411 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 EXOC1Q9NV70 894 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 PFASO15067 1338 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 PITPNM2Q9BZ72 1349 aa6.65□□□□□ -1.34
CPS1-207ENST00000479988 H0YCG3 227 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 ADCY3O60266 1144 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 ZBTB48P10074 688 aaPredicted RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 CYP2D6P10635 497 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 RAG1P15918 1043 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 YBX3P16989 372 aaKnown RBP eCLIP6.65□□□□□ -1.35
CPS1-207ENST00000479988 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 SLC44A5Q8NCS7 719 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 OR6J1Q8NGC5 347 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 ZNHIT6Q9NWK9 470 aaKnown RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 TRPM3Q9HCF6 1732 aaPredicted RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 PARP4Q9UKK3 1724 aaKnown RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 DYNC1LI2O43237 492 aaPredicted RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 AKR1B1P15121 316 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 TXKP42681 527 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 SLC8A3P57103 927 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 SLC39A14Q15043 492 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 PIK3AP1Q6ZUJ8 805 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 NEDD1Q8NHV4 660 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 WDR11Q9BZH6 1224 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 INO80BQ9C086 356 aaPredicted RBP6.65□□□□□ -1.35
CPS1-207ENST00000479988 CREBZFQ9NS37 354 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 IMPACTQ9P2X3 320 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 PAXBP1Q9Y5B6 917 aa6.65□□□□□ -1.35
CPS1-207ENST00000479988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.65□□□□□ -1.35
CPS1-207ENST00000479988 ALS2Q96Q42 1657 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 XPOTO43592 962 aaKnown RBP6.64□□□□□ -1.35
CPS1-207ENST00000479988 GTPBP6O43824 516 aaPredicted RBP6.64□□□□□ -1.35
CPS1-207ENST00000479988 CALCRLQ16602 461 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 XKR9Q5GH70 373 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 RRAGBQ5VZM2 374 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 SLFN12Q8IYM2 578 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 PDILTQ8N807 584 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 FAM167AQ96KS9 214 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 RNF26Q9BY78 433 aaPredicted RBP6.64□□□□□ -1.35
CPS1-207ENST00000479988 KIAA1468Q9P260 1216 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 DNM3Q9UQ16 869 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 ATP11BQ9Y2G3 1177 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 UQCRHLA0A096LP55 91 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 GOLGA6L9A6NEM1 432 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 STRNO43815 780 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 ZNF202O95125 648 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 UQCRHP07919 91 aa6.64□□□□□ -1.35
CPS1-207ENST00000479988 KLRK1P26718 216 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms