RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 EDAQ92838 391 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
CCDC18-208ENST00000479653 PABPC5Q96DU9 382 aaKnown RBP13.39□□□□□ -0.27
CCDC18-208ENST00000479653 MRPL38Q96DV4 380 aaKnown RBP13.39□□□□□ -0.27
CCDC18-208ENST00000479653 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 C5orf42Q9H799 3197 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 BCAR3O75815 825 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 CPT1AP50416 773 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
CCDC18-208ENST00000479653 PKN1Q16512 942 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
CCDC18-208ENST00000479653 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 C16orf86Q6ZW13 317 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 A1CFQ9NQ94 594 aaKnown RBP13.38□□□□□ -0.27
CCDC18-208ENST00000479653 CLDND1Q9NY35 253 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
CCDC18-208ENST00000479653 ISY1Q9ULR0 285 aaKnown RBP13.38□□□□□ -0.27
CCDC18-208ENST00000479653 TMEM221A6NGB7 291 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 M0R296 226 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 OAZ1P54368 228 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 CLUL1Q15846 466 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 LRRFIP1Q32MZ4 808 aaKnown RBP13.37□□□□□ -0.27
CCDC18-208ENST00000479653 DUSP28Q4G0W2 176 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 BRDTQ58F21 947 aaPredicted RBP13.37□□□□□ -0.27
CCDC18-208ENST00000479653 TCEAL5Q5H9L2 206 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 CNKSR3Q6P9H4 555 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 BMP8AQ7Z5Y6 402 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 DDRGK1Q96HY6 314 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
CCDC18-208ENST00000479653 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCDC18-208ENST00000479653 WDR11Q9BZH6 1224 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
CCDC18-208ENST00000479653 PTPRZ1P23471 2315 aaPredicted RBP13.36□□□□□ -0.27
CCDC18-208ENST00000479653 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
CCDC18-208ENST00000479653 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
CCDC18-208ENST00000479653 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
CCDC18-208ENST00000479653 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
CCDC18-208ENST00000479653 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
CCDC18-208ENST00000479653 VTA1Q9NP79 307 aa13.36□□□□□ -0.27
CCDC18-208ENST00000479653 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
CCDC18-208ENST00000479653 COL4A4P53420 1690 aaPredicted RBP13.36□□□□□ -0.27
CCDC18-208ENST00000479653 ABHD14A-ACY1A0A1B0GW23 586 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 MBD4O95243 580 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 ALAS1P13196 640 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC18-208ENST00000479653 IKBKEQ14164 716 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 GPNMBQ14956 572 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 PTGISQ16647 500 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 LRRC8DQ7L1W4 858 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 AFAP1L1Q8TED9 768 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 PURBQ96QR8 312 aaKnown RBP13.35□□□□□ -0.27
CCDC18-208ENST00000479653 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
CCDC18-208ENST00000479653 PARP14Q460N5 1801 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 STXBP3O00186 592 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 GOLIM4O00461 696 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 SELPP16109 830 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
CCDC18-208ENST00000479653 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
CCDC18-208ENST00000479653 GPM6BQ13491 265 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 SMAD2Q15796 467 aaKnown RBP13.34□□□□□ -0.27
CCDC18-208ENST00000479653 TCTN1Q2MV58 587 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 EPC2Q52LR7 807 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 ERMP1Q7Z2K6 904 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 AACSQ86V21 672 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 FBXL6Q8N531 539 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 SSH3Q8TE77 659 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
CCDC18-208ENST00000479653 IRF2BPLQ9H1B7 796 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
CCDC18-208ENST00000479653 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
CCDC18-208ENST00000479653 MCM3APO60318 1980 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 RBAK-RBAKDNI3L0D1 243 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 NBNO60934 754 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 EFCAB14O75071 495 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 CENPBP07199 599 aaPredicted RBP13.33□□□□□ -0.28
CCDC18-208ENST00000479653 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 RPAINQ86UA6 219 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 CYP39A1Q9NYL5 469 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 MYO15AQ9UKN7 3530 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 RAD50Q92878 1312 aa13.33□□□□□ -0.28
CCDC18-208ENST00000479653 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms