RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ELNP15502 786 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
PCIF1-202ENST00000479348 RPS6P62753 249 aaKnown RBP16.12■□□□□ 0.17
PCIF1-202ENST00000479348 UBXN2AP68543 259 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
PCIF1-202ENST00000479348 HEATR3Q7Z4Q2 680 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 DNERQ8NFT8 737 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 TRIB2Q92519 343 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 BARHL2Q9NY43 387 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
PCIF1-202ENST00000479348 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
PCIF1-202ENST00000479348 OPLAHO14841 1288 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 CFBP00751 764 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 HSD17B4P51659 736 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 CCL14Q16627 93 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 FAM177A1Q8N128 213 aaPredicted RBP16.11■□□□□ 0.17
PCIF1-202ENST00000479348 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
PCIF1-202ENST00000479348 PHKBQ93100 1093 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 GLT8D2Q9H1C3 349 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 NRBP1Q9UHY1 535 aa16.11■□□□□ 0.17
PCIF1-202ENST00000479348 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 ASB14A6NK59 587 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 B4DLN1 442 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 DEXIO95424 95 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 LARGE1O95461 756 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 CALML3P27482 149 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
PCIF1-202ENST00000479348 CNTN2Q02246 1040 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 PKN1Q16512 942 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 WWC2Q6AWC2 1192 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 SH3TC2Q8TF17 1288 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 CUL5Q93034 780 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 MPHOSPH6Q99547 160 aaKnown RBP16.1■□□□□ 0.17
PCIF1-202ENST00000479348 TINF2Q9BSI4 451 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 FLRT1Q9NZU1 646 aa16.1■□□□□ 0.17
PCIF1-202ENST00000479348 STK36Q9NRP7 1315 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 SOWAHBA6NEL2 793 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 STXBP3O00186 592 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 PIK3CDO00329 1044 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 INHAP05111 366 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 NAPAP54920 295 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 MAP3K21Q5TCX8 1036 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 SYTL5Q8TDW5 730 aaPredicted RBP16.09■□□□□ 0.17
PCIF1-202ENST00000479348 WASF1Q92558 559 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
PCIF1-202ENST00000479348 ZNF333Q96JL9 665 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 FGD4Q96M96 766 aa16.09■□□□□ 0.17
PCIF1-202ENST00000479348 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
PCIF1-202ENST00000479348 CTDNEP1O95476 244 aa16.08■□□□□ 0.16
PCIF1-202ENST00000479348 CCDC148Q8NFR7 591 aa16.08■□□□□ 0.16
PCIF1-202ENST00000479348 MORC4Q8TE76 937 aa16.08■□□□□ 0.16
PCIF1-202ENST00000479348 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
PCIF1-202ENST00000479348 ABHD8Q96I13 439 aa16.08■□□□□ 0.16
PCIF1-202ENST00000479348 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 PLXNA1Q9UIW2 1896 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 MEIS2O14770 477 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 CYP2C19P33261 490 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 ALDH5A1P51649 535 aaPredicted RBP16.07■□□□□ 0.16
PCIF1-202ENST00000479348 CACNB2Q08289 660 aaPredicted RBP16.07■□□□□ 0.16
PCIF1-202ENST00000479348 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
PCIF1-202ENST00000479348 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 RMDN3Q96TC7 470 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 ZMYND12Q9H0C1 365 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 HMX1Q9NP08 348 aaPredicted RBP16.07■□□□□ 0.16
PCIF1-202ENST00000479348 RIC8AQ9NPQ8 531 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
PCIF1-202ENST00000479348 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
PCIF1-202ENST00000479348 RBBP6Q7Z6E9 1792 aaKnown RBP16.06■□□□□ 0.16
PCIF1-202ENST00000479348 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
PCIF1-202ENST00000479348 CAPN2P17655 700 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 XBP1P17861 261 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 GNA11P29992 359 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 HOXA13P31271 388 aaPredicted RBP16.06■□□□□ 0.16
PCIF1-202ENST00000479348 ADCY7P51828 1080 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 CCDC83Q8IWF9 413 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 TMX3Q96JJ7 454 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 TAAR1Q96RJ0 339 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 ABHD16BQ9H3Z7 469 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.06■□□□□ 0.16
PCIF1-202ENST00000479348 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 ASTN1O14525 1302 aa16.06■□□□□ 0.16
PCIF1-202ENST00000479348 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
PCIF1-202ENST00000479348 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms