RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 TAPT1Q6NXT6 567 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 EEPD1Q7L9B9 569 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 CAGE1Q8TC20 777 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 MORC4Q8TE76 937 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 HAUS7Q99871 368 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 UBE2ZQ9H832 354 aaPredicted RBP10.6□□□□□ -0.71
ITCH-204ENST00000479215 C11orf16Q9NQ32 467 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 PNMA2Q9UL42 364 aa10.6□□□□□ -0.71
ITCH-204ENST00000479215 ZNF536O15090 1300 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 COL11A1P12107 1806 aaPredicted RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 IGKV6D-41A0A0C4DH26 115 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 EPOPA6NHQ4 379 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 MYL3P08590 195 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 TSPY3P0CV98 308 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 TSPY8P0CW00 308 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 MS4A1P11836 297 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 KRT40Q6A162 431 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 FBXO16Q8IX29 292 aaPredicted RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 FAM178BQ8IXR5 827 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 GMCL1Q96IK5 515 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 STRBPQ96SI9 672 aaKnown RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 CRBNQ96SW2 442 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 RAD9AQ99638 391 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 CHMP4BQ9H444 224 aaKnown RBP10.59□□□□□ -0.71
ITCH-204ENST00000479215 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 CYP39A1Q9NYL5 469 aa10.59□□□□□ -0.71
ITCH-204ENST00000479215 PARP14Q460N5 1801 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 ABHD14A-ACY1A0A1B0GW23 586 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 LPXNO60711 386 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 APPP05067 770 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 TDO2P48775 406 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 PTPROQ16827 1216 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 NSMFQ6X4W1 530 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 LRRC47Q8N1G4 583 aaKnown RBP10.58□□□□□ -0.72
ITCH-204ENST00000479215 OR6J1Q8NGC5 347 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 AFAP1L1Q8TED9 768 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 NACAP1Q9BZK3 213 aa10.58□□□□□ -0.72
ITCH-204ENST00000479215 PUS7LQ9H0K6 701 aaKnown RBP10.58□□□□□ -0.72
ITCH-204ENST00000479215 MYH8P13535 1937 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 GSG1L2A8MUP6 293 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 DCXO43602 365 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
ITCH-204ENST00000479215 KCNA5P22460 613 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 ERVK-21P61565 698 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 PPP2R5BQ15173 497 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
ITCH-204ENST00000479215 RCSD1Q6JBY9 416 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 CNKSR3Q6P9H4 555 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 STK11IPQ8N1F8 1099 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 NEDD1Q8NHV4 660 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
ITCH-204ENST00000479215 BCL11AQ9H165 835 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 PRKAG3Q9UGI9 489 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 CCPG1Q9ULG6 757 aa10.57□□□□□ -0.72
ITCH-204ENST00000479215 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
ITCH-204ENST00000479215 A6NJR5 290 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 NCK2O43639 380 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 GJB5O95377 273 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 ICAM1P05362 532 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 SELPP16109 830 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 MCCP23508 829 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 WDR5P61964 334 aaKnown RBP10.56□□□□□ -0.72
ITCH-204ENST00000479215 NHLH1Q02575 133 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 IKBKEQ14164 716 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 PTGISQ16647 500 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 SLFNL1Q499Z3 407 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 GDPD5Q8WTR4 605 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 SCFD2Q8WU76 684 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 SNX27Q96L92 541 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 MFSD14AQ96MC6 490 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 SUGCTQ9HAC7 445 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 CD320Q9NPF0 282 aa10.56□□□□□ -0.72
ITCH-204ENST00000479215 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 PATL2C9JE40 543 aaKnown RBP10.55□□□□□ -0.72
ITCH-204ENST00000479215 PRDM1O75626 825 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 ALDH5A1P51649 535 aaPredicted RBP10.55□□□□□ -0.72
ITCH-204ENST00000479215 TFAP4Q01664 338 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 PDE4DQ08499 809 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 DNERQ8NFT8 737 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.55□□□□□ -0.72
ITCH-204ENST00000479215 APPBP2Q92624 585 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 SAMD11Q96NU1 681 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 PRRX2Q99811 253 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 PRR12Q9ULL5 1215 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 STX8Q9UNK0 236 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 INSL6Q9Y581 213 aa10.55□□□□□ -0.72
ITCH-204ENST00000479215 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
ITCH-204ENST00000479215 PTPDC1A2A3K4 754 aa10.54□□□□□ -0.72
ITCH-204ENST00000479215 LRRC37A2A6NM11 1700 aa10.54□□□□□ -0.72
ITCH-204ENST00000479215 TXNP10599 105 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms