RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 LARGE1O95461 756 aa17.56■□□□□ 0.4
COL16A1-211ENST00000479100 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
COL16A1-211ENST00000479100 IFNAR1P17181 557 aa17.56■□□□□ 0.4
COL16A1-211ENST00000479100 CNTN2Q02246 1040 aa17.56■□□□□ 0.4
COL16A1-211ENST00000479100 SCRN1Q12765 414 aa17.56■□□□□ 0.4
COL16A1-211ENST00000479100 RNF207Q6ZRF8 634 aa17.56■□□□□ 0.4
COL16A1-211ENST00000479100 GPKOWQ92917 476 aaPredicted RBP eCLIP17.56■□□□□ 0.4
COL16A1-211ENST00000479100 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
COL16A1-211ENST00000479100 SMCHD1A6NHR9 2005 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 MYH6P13533 1939 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 CFBP00751 764 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 HOXC6P09630 235 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 CAPN2P17655 700 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 SSRP1Q08945 709 aaKnown RBP17.55■□□□□ 0.4
COL16A1-211ENST00000479100 NTRK3Q16288 839 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 ZNF792Q3KQV3 632 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL16A1-211ENST00000479100 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
COL16A1-211ENST00000479100 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 TBC1D5Q92609 795 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 DEFB118Q96PH6 123 aa17.55■□□□□ 0.4
COL16A1-211ENST00000479100 PRPF3O43395 683 aaKnown RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 DTNBO60941 627 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 CDKL5O76039 1030 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 FARP2O94887 1054 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 HMGCRP04035 888 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 TRIM32Q13049 653 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 TRIB2Q92519 343 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 MAML3Q96JK9 1138 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 ZSCAN31Q96LW9 406 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 PURBQ96QR8 312 aaKnown RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 FLRT1Q9NZU1 646 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 COLQQ9Y215 455 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-211ENST00000479100 CEP290O15078 2479 aa17.54■□□□□ 0.4
COL16A1-211ENST00000479100 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 NAPAP54920 295 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 MAP3K21Q5TCX8 1036 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 MFSD14CQ5VZR4 134 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 RNF26Q9BY78 433 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-211ENST00000479100 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL16A1-211ENST00000479100 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
COL16A1-211ENST00000479100 GCOM1H8Y6P7 765 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-211ENST00000479100 OPLAHO14841 1288 aa17.52■□□□□ 0.4
COL16A1-211ENST00000479100 POLR2MP0CAP2 368 aa17.52■□□□□ 0.4
COL16A1-211ENST00000479100 SCG2P13521 617 aa17.52■□□□□ 0.4
COL16A1-211ENST00000479100 CYP2C19P33261 490 aa17.52■□□□□ 0.4
COL16A1-211ENST00000479100 PFKFB3Q16875 520 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-211ENST00000479100 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
COL16A1-211ENST00000479100 FAM133AQ8N9E0 248 aa17.52■□□□□ 0.4
COL16A1-211ENST00000479100 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.4
COL16A1-211ENST00000479100 ZNFX1Q9P2E3 1918 aaKnown RBP17.52■□□□□ 0.4
COL16A1-211ENST00000479100 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 RPTORQ8N122 1335 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-211ENST00000479100 FXR1P51114 621 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL16A1-211ENST00000479100 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 SYTL5Q8TDW5 730 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-211ENST00000479100 DPF3Q92784 378 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 CUL5Q93034 780 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-211ENST00000479100 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
COL16A1-211ENST00000479100 ADD3Q9UEY8 706 aaKnown RBP17.51■□□□□ 0.39
COL16A1-211ENST00000479100 STXBP3O00186 592 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
COL16A1-211ENST00000479100 DEXIO95424 95 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
COL16A1-211ENST00000479100 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
COL16A1-211ENST00000479100 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
COL16A1-211ENST00000479100 PKN1Q16512 942 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 FCHSD1Q86WN1 690 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 FGD4Q96M96 766 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 PRO3102Q9H379 93 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 PSTPIP2Q9H939 334 aa17.5■□□□□ 0.39
COL16A1-211ENST00000479100 hCG_1984214I3L0E3 225 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 CTDNEP1O95476 244 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 MCM2P49736 904 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 HSD17B4P51659 736 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 CACNB2Q08289 660 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-211ENST00000479100 PRAMEF19Q5SWL8 479 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 PPP1R18Q6NYC8 613 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 USP17L6PQ6QN14 398 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-211ENST00000479100 ZNF713Q8N859 430 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-211ENST00000479100 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
COL16A1-211ENST00000479100 MAF1Q9H063 256 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms