RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 RNF113AO15541 343 aaKnown RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 FGAP02671 866 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 IGKV5-2P06315 115 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 PLEKP08567 350 aaPredicted RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 PAEPP09466 180 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 FAM163BP0C2L3 166 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 ALADP13716 330 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 TUBP50607 506 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 DNA2P51530 1060 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 MKRN4PQ13434 485 aaPredicted RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 PPP1R15BQ5SWA1 713 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 NEUROD6Q96NK8 337 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 SLC26A6Q9BXS9 759 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 NOVA2Q9UNW9 492 aaKnown RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 PARP1P09874 1014 aaKnown RBP23.45■■□□□ 1.34
SDF4-206ENST00000478938 NR5A1Q13285 461 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 MDM1Q8TC05 714 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 WHAMMQ8TF30 809 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 COPRSQ9NQ92 184 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 ZNHIT6Q9NWK9 470 aaKnown RBP23.45■■□□□ 1.34
SDF4-206ENST00000478938 LGALS16A8MUM7 142 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 H0YGN5 161 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 LUC7L3O95232 432 aaKnown RBP23.45■■□□□ 1.34
SDF4-206ENST00000478938 IRF2BP1Q8IU81 584 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 GPIHBP1Q8IV16 184 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 HOMEZQ8IX15 550 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 KRT12Q99456 494 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 CEP131Q9UPN4 1083 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 NFS1Q9Y697 457 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 EID1Q9Y6B2 187 aa23.45■■□□□ 1.34
SDF4-206ENST00000478938 GSTA1P08263 222 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 GUCY1A2P33402 732 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 TAF11Q15544 211 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 UAP1Q16222 522 aaPredicted RBP23.44■■□□□ 1.34
SDF4-206ENST00000478938 GALNT15Q8N3T1 639 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 RFX5P48382 616 aaPredicted RBP23.44■■□□□ 1.34
SDF4-206ENST00000478938 MXRA7P84157 204 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 MTHFD1LQ6UB35 978 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 ARHGAP22Q7Z5H3 698 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 TEKT4Q8WW24 435 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 CHMP6Q96FZ7 201 aa23.44■■□□□ 1.34
SDF4-206ENST00000478938 TRIM49BA6NDI0 452 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 CFAP73A6NFT4 308 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 NUTM2BA6NNL0 878 aaPredicted RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 NUTM2EB1AL46 878 aaPredicted RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 STXBP3O00186 592 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 CLSTN1O94985 981 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 NQO1P15559 274 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 MAGOHP61326 146 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 NTRK3Q16288 839 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 CCDC170Q8IYT3 715 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 SYMPKQ92797 1274 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 MAGOHBQ96A72 148 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 IFIH1Q9BYX4 1025 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 PTPRUQ92729 1446 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 TRIM21P19474 475 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 CCND1P24385 295 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 SPA17Q15506 151 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 KCTD19Q17RG1 926 aaPredicted RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 APOA5Q6Q788 366 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 LRIG3Q6UXM1 1119 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 ANKRD13CQ8N6S4 541 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 TLR10Q9BXR5 811 aa23.43■■□□□ 1.34
SDF4-206ENST00000478938 ANGEL1Q9UNK9 670 aaKnown RBP23.43■■□□□ 1.34
SDF4-206ENST00000478938 PPFIA2O75334 1257 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 CTNNA1P35221 906 aaKnown RBP23.42■■□□□ 1.34
SDF4-206ENST00000478938 HLTFQ14527 1009 aaKnown RBP eCLIP23.42■■□□□ 1.34
SDF4-206ENST00000478938 C1QTNF12Q5T7M4 302 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 GORASP1Q9BQQ3 440 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 USO1O60763 962 aaKnown RBP23.42■■□□□ 1.34
SDF4-206ENST00000478938 RILPL1Q5EBL4 403 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 HHATQ5VTY9 493 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 CYB5R4Q7L1T6 521 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 ZNF507Q8TCN5 953 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 TBC1D5Q92609 795 aa23.42■■□□□ 1.34
SDF4-206ENST00000478938 MMP1P03956 469 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 FAM81AQ8TBF8 368 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 NLRP3Q96P20 1036 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 LRRC4CQ9HCJ2 640 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 SALL4Q9UJQ4 1053 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 C2CD2Q9Y426 696 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 RASSF10A6NK89 507 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 BIRC3Q13489 604 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 CFAP221Q4G0U5 840 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 ANKS4BQ8N8V4 417 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 NAF1Q96HR8 494 aaKnown RBP23.41■■□□□ 1.34
SDF4-206ENST00000478938 CCDC42Q96M95 316 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 ABCF3Q9NUQ8 709 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 GGT7Q9UJ14 662 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 GDAQ9Y2T3 454 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 PCDHA13Q9Y5I0 950 aa23.41■■□□□ 1.34
SDF4-206ENST00000478938 A0A1W2PQC6 194 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 RNASE9P60153 205 aaKnown RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 SAFBQ15424 915 aaKnown RBP eCLIP23.4■■□□□ 1.34
SDF4-206ENST00000478938 TTYH3Q9C0H2 523 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 THRAP3Q9Y2W1 955 aaKnown RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 XDHP47989 1333 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 DDX60Q8IY21 1712 aaKnown RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 BTBD11A6QL63 1104 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 CTNND1O60716 968 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms