RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PGK2P07205 417 aa30.98■■■□□ 2.55
CCM2-211ENST00000478582 NTRK3Q16288 839 aa30.98■■■□□ 2.55
CCM2-211ENST00000478582 HTATIP2Q9BUP3 242 aa30.98■■■□□ 2.55
CCM2-211ENST00000478582 OGDHLQ9ULD0 1010 aa30.98■■■□□ 2.55
CCM2-211ENST00000478582 SMCHD1A6NHR9 2005 aa30.97■■■□□ 2.55
CCM2-211ENST00000478582 CYP2C19P33261 490 aa30.97■■■□□ 2.55
CCM2-211ENST00000478582 CCT2P78371 535 aaKnown RBP30.97■■■□□ 2.55
CCM2-211ENST00000478582 CYP39A1Q9NYL5 469 aa30.97■■■□□ 2.55
CCM2-211ENST00000478582 PFKFB2O60825 505 aa30.96■■■□□ 2.55
CCM2-211ENST00000478582 PIBF1Q8WXW3 757 aa30.96■■■□□ 2.55
CCM2-211ENST00000478582 BAZ2BQ9UIF8 2168 aaKnown RBP30.95■■■□□ 2.55
CCM2-211ENST00000478582 IFNAR1P17181 557 aa30.95■■■□□ 2.55
CCM2-211ENST00000478582 NSMFQ6X4W1 530 aa30.95■■■□□ 2.55
CCM2-211ENST00000478582 MCF2L2Q86YR7 1114 aa30.95■■■□□ 2.55
CCM2-211ENST00000478582 FAM133AQ8N9E0 248 aa30.95■■■□□ 2.55
CCM2-211ENST00000478582 PAWRQ96IZ0 340 aaKnown RBP30.95■■■□□ 2.55
CCM2-211ENST00000478582 MAML3Q96JK9 1138 aa30.95■■■□□ 2.55
CCM2-211ENST00000478582 NCOA5Q9HCD5 579 aaKnown RBP30.95■■■□□ 2.55
CCM2-211ENST00000478582 V9GY48 417 aaPredicted RBP30.95■■■□□ 2.55
CCM2-211ENST00000478582 GHRHRQ02643 423 aa30.94■■■□□ 2.54
CCM2-211ENST00000478582 LHX8Q68G74 356 aa30.94■■■□□ 2.54
CCM2-211ENST00000478582 ZNF467Q7Z7K2 595 aaPredicted RBP30.94■■■□□ 2.54
CCM2-211ENST00000478582 SAMD3Q8N6K7 520 aa30.94■■■□□ 2.54
CCM2-211ENST00000478582 DPF3Q92784 378 aa30.94■■■□□ 2.54
CCM2-211ENST00000478582 SLKQ9H2G2 1235 aaPredicted RBP30.94■■■□□ 2.54
CCM2-211ENST00000478582 MYH6P13533 1939 aa30.94■■■□□ 2.54
CCM2-211ENST00000478582 POTEB2H3BUK9 544 aa30.93■■■□□ 2.54
CCM2-211ENST00000478582 OPLAHO14841 1288 aa30.93■■■□□ 2.54
CCM2-211ENST00000478582 STK3Q13188 491 aa30.93■■■□□ 2.54
CCM2-211ENST00000478582 BAATQ14032 418 aaPredicted RBP30.93■■■□□ 2.54
CCM2-211ENST00000478582 RNF207Q6ZRF8 634 aa30.93■■■□□ 2.54
CCM2-211ENST00000478582 NECAB2Q7Z6G3 386 aa30.93■■■□□ 2.54
CCM2-211ENST00000478582 MAP3K20Q9NYL2 800 aaKnown RBP30.93■■■□□ 2.54
CCM2-211ENST00000478582 RBM27Q9P2N5 1060 aaKnown RBP30.93■■■□□ 2.54
CCM2-211ENST00000478582 PRPF3O43395 683 aaKnown RBP30.92■■■□□ 2.54
CCM2-211ENST00000478582 SCRN1Q12765 414 aa30.92■■■□□ 2.54
CCM2-211ENST00000478582 ME3Q16798 604 aa30.92■■■□□ 2.54
CCM2-211ENST00000478582 MSL3Q8N5Y2 521 aaKnown RBP30.92■■■□□ 2.54
CCM2-211ENST00000478582 RNF26Q9BY78 433 aaPredicted RBP30.92■■■□□ 2.54
CCM2-211ENST00000478582 LIMCH1Q9UPQ0 1083 aa30.92■■■□□ 2.54
CCM2-211ENST00000478582 hCG_1642624A0A1W2PR95 340 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 PTPDC1A2A3K4 754 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 CYBAP13498 195 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 CNGA1P29973 690 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 MNX1P50219 401 aaPredicted RBP30.91■■■□□ 2.54
CCM2-211ENST00000478582 RPS6P62753 249 aaKnown RBP30.91■■■□□ 2.54
CCM2-211ENST00000478582 CNTN2Q02246 1040 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 MAMDC4Q6UXC1 1216 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 TRPV1Q8NER1 839 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 DIS3LQ8TF46 1054 aaKnown RBP30.91■■■□□ 2.54
CCM2-211ENST00000478582 FGD4Q96M96 766 aa30.91■■■□□ 2.54
CCM2-211ENST00000478582 hCG_1984214I3L0E3 225 aa30.9■■■□□ 2.54
CCM2-211ENST00000478582 CPLX1O14810 134 aa30.9■■■□□ 2.54
CCM2-211ENST00000478582 MSCO60682 206 aa30.9■■■□□ 2.54
CCM2-211ENST00000478582 CPLX2Q6PUV4 134 aaKnown RBP30.9■■■□□ 2.54
CCM2-211ENST00000478582 ZNF713Q8N859 430 aaPredicted RBP30.9■■■□□ 2.54
CCM2-211ENST00000478582 TBC1D5Q92609 795 aa30.9■■■□□ 2.54
CCM2-211ENST00000478582 DDX20Q9UHI6 824 aaKnown RBP30.9■■■□□ 2.54
CCM2-211ENST00000478582 SOWAHBA6NEL2 793 aa30.89■■■□□ 2.54
CCM2-211ENST00000478582 HSD17B4P51659 736 aa30.89■■■□□ 2.54
CCM2-211ENST00000478582 SLC30A10Q6XR72 485 aa30.89■■■□□ 2.54
CCM2-211ENST00000478582 NOL8Q76FK4 1167 aaKnown RBP30.89■■■□□ 2.54
CCM2-211ENST00000478582 TINF2Q9BSI4 451 aa30.89■■■□□ 2.54
CCM2-211ENST00000478582 ST18O60284 1047 aa30.88■■■□□ 2.53
CCM2-211ENST00000478582 LARGE1O95461 756 aa30.88■■■□□ 2.53
CCM2-211ENST00000478582 PFKFB3Q16875 520 aaPredicted RBP30.88■■■□□ 2.53
CCM2-211ENST00000478582 PHKBQ93100 1093 aa30.88■■■□□ 2.53
CCM2-211ENST00000478582 ZSCAN31Q96LW9 406 aaPredicted RBP30.88■■■□□ 2.53
CCM2-211ENST00000478582 PLXNA1Q9UIW2 1896 aa30.88■■■□□ 2.53
CCM2-211ENST00000478582 LOC102724159A0A0B4J2E5 919 aa30.87■■■□□ 2.53
CCM2-211ENST00000478582 CALML3P27482 149 aa30.87■■■□□ 2.53
CCM2-211ENST00000478582 AKAP17AQ02040 695 aaKnown RBP30.87■■■□□ 2.53
CCM2-211ENST00000478582 PWP2Q15269 919 aaKnown RBP30.87■■■□□ 2.53
CCM2-211ENST00000478582 PKN1Q16512 942 aa30.87■■■□□ 2.53
CCM2-211ENST00000478582 WWC2Q6AWC2 1192 aa30.87■■■□□ 2.53
CCM2-211ENST00000478582 SYTL5Q8TDW5 730 aaPredicted RBP30.87■■■□□ 2.53
CCM2-211ENST00000478582 GTF3C6Q969F1 213 aa30.87■■■□□ 2.53
CCM2-211ENST00000478582 ADD3Q9UEY8 706 aaKnown RBP30.87■■■□□ 2.53
CCM2-211ENST00000478582 SYNGAP1Q96PV0 1343 aa30.87■■■□□ 2.53
CCM2-211ENST00000478582 CDKL5O76039 1030 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 SLC34A2O95436 690 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 CFBP00751 764 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 SCG2P13521 617 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 HEATR3Q7Z4Q2 680 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 DNERQ8NFT8 737 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 SLC26A6Q9BXS9 759 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 C11orf49Q9H6J7 331 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 BARHL2Q9NY43 387 aa30.86■■■□□ 2.53
CCM2-211ENST00000478582 ASTN1O14525 1302 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 SSRP1Q08945 709 aaKnown RBP30.85■■■□□ 2.53
CCM2-211ENST00000478582 PRAMEF19Q5SWL8 479 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 PPP1R18Q6NYC8 613 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 TEX2Q8IWB9 1127 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 TRIM22Q8IYM9 498 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 GPKOWQ92917 476 aaPredicted RBP eCLIP30.85■■■□□ 2.53
CCM2-211ENST00000478582 PURBQ96QR8 312 aaKnown RBP30.85■■■□□ 2.53
CCM2-211ENST00000478582 NRBP1Q9UHY1 535 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 NR2E3Q9Y5X4 410 aa30.85■■■□□ 2.53
CCM2-211ENST00000478582 ASB14A6NK59 587 aa30.84■■■□□ 2.53
CCM2-211ENST00000478582 H0YGN5 161 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms