RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ACBD5Q5T8D3 534 aaPredicted RBP5.87□□□□□ -1.47
SMARCA1-204ENST00000478420 FYB2Q5VWT5 728 aa5.87□□□□□ -1.47
SMARCA1-204ENST00000478420 KREMEN2Q8NCW0 462 aa5.87□□□□□ -1.47
SMARCA1-204ENST00000478420 OSBP2Q969R2 916 aa5.87□□□□□ -1.47
SMARCA1-204ENST00000478420 C1orf159Q96HA4 380 aa5.87□□□□□ -1.47
SMARCA1-204ENST00000478420 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 NPHS1O60500 1241 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 PAPLNO95428 1278 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 ITGB5P18084 799 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 SUMO1P63165 101 aaKnown RBP5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 FAM209AQ5JX71 171 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 FOXB2Q5VYV0 432 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 USP53Q70EK8 1073 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 SH3TC2Q8TF17 1288 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 DIO2Q92813 273 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 ASIC4Q96FT7 647 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 PLCD4Q9BRC7 762 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 DHRS4Q9BTZ2 278 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 IMPACTQ9P2X3 320 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 PTCH2Q9Y6C5 1203 aa5.86□□□□□ -1.47
SMARCA1-204ENST00000478420 CCDC163A0A0D9SF12 145 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 A0A1W2PQJ5 194 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 GLI1P08151 1106 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 PRKCAP17252 672 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 LTBRP36941 435 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 CORO7P57737 925 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 TESK1Q15569 626 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 DENND5AQ6IQ26 1287 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 NLRX1Q86UT6 975 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 NLGN2Q8NFZ4 835 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 FAM168AQ92567 244 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 RNF32Q9H0A6 362 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 CRTAC1Q9NQ79 661 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 TMEFF2Q9UIK5 374 aaPredicted RBP5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 ACSL6Q9UKU0 697 aa5.85□□□□□ -1.47
SMARCA1-204ENST00000478420 C7orf72A4D263 438 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 MYO1BO43795 1136 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 PNLIPP16233 465 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 ARL4AP40617 200 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 CYP4F8P98187 520 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 INF2Q27J81 1249 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 CCDC103Q8IW40 242 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 SIRT2Q8IXJ6 389 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 DCAF4Q8WV16 495 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 SHISA4Q96DD7 197 aa5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 RNPC3Q96LT9 517 aaKnown RBP5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 YBX2Q9Y2T7 364 aaKnown RBP5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 MRPS23Q9Y3D9 190 aaKnown RBP5.84□□□□□ -1.47
SMARCA1-204ENST00000478420 BLACEA4D250 179 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 ARNTLO00327 626 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 EFEMP2O95967 443 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 GALK1P51570 392 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 GTF2A2P52657 109 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 RPL11P62913 178 aaKnown RBP5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 MVKQ03426 396 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 SQSTM1Q13501 440 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 KIR3DS1Q14943 382 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 NTRK3Q16288 839 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 RSPO2Q6UXX9 243 aaPredicted RBP5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 PHF20Q9BVI0 1012 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 SLC6A17Q9H1V8 727 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 PDLIM7Q9NR12 457 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 GPR27Q9NS67 375 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 GULP1Q9UBP9 304 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 TMA7Q9Y2S6 64 aaKnown RBP5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 TIMM13Q9Y5L4 95 aaPredicted RBP5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 NPFFR2Q9Y5X5 522 aa5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
SMARCA1-204ENST00000478420 STYK1Q6J9G0 422 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 GIMAP6Q6P9H5 292 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 MPZL3Q6UWV2 235 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 LZTR1Q8N653 840 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 RCBTB1Q8NDN9 531 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 USP33Q8TEY7 942 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 PTPRN2Q92932 1015 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 INTS4Q96HW7 963 aaKnown RBP5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 KANSL2Q9H9L4 492 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 TMEM260Q9NX78 707 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 BTG4Q9NY30 223 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 RWDD3Q9Y3V2 267 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 PCDHA2Q9Y5H9 948 aa5.82□□□□□ -1.48
SMARCA1-204ENST00000478420 ESYT3A0FGR9 886 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 MSL3P1P0C860 447 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 LCP1P13796 627 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 TACR1P25103 407 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 PDE6BP35913 854 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 BCL6P41182 706 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 GABREP78334 506 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 ADGRF1Q5T601 910 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 BICRALQ6AI39 1079 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 MCTP1Q6DN14 999 aa5.81□□□□□ -1.48
SMARCA1-204ENST00000478420 MAMDC2Q7Z304 686 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms