RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CCDC144BQ3MJ40 725 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 APOA5Q6Q788 366 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 BLOC1S2Q6QNY1 142 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 SYNE3Q6ZMZ3 975 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 EEPD1Q7L9B9 569 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 CMTR1Q8N1G2 835 aaKnown RBP18.08■□□□□ 0.48
HMGA1-206ENST00000478214 FANCBQ8NB91 859 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
HMGA1-206ENST00000478214 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 LZTS2Q9BRK4 669 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
HMGA1-206ENST00000478214 PGK1P00558 417 aa18.07■□□□□ 0.48
HMGA1-206ENST00000478214 LRRC41Q15345 812 aa18.07■□□□□ 0.48
HMGA1-206ENST00000478214 PRPF38BQ5VTL8 546 aaKnown RBP18.07■□□□□ 0.48
HMGA1-206ENST00000478214 FBXO16Q8IX29 292 aaPredicted RBP18.07■□□□□ 0.48
HMGA1-206ENST00000478214 MAF1Q9H063 256 aa18.07■□□□□ 0.48
HMGA1-206ENST00000478214 COL20A1Q9P218 1284 aa18.07■□□□□ 0.48
HMGA1-206ENST00000478214 MCM3APO60318 1980 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 LCTP09848 1927 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.06■□□□□ 0.48
HMGA1-206ENST00000478214 KBTBD13C9JR72 458 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 ZBTB43O43298 467 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 CFBP00751 764 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 CASTP20810 708 aaKnown RBP18.06■□□□□ 0.48
HMGA1-206ENST00000478214 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 PSMA5P28066 241 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 ADCYAP1R1P41586 468 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 FGD1P98174 961 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 TAPT1Q6NXT6 567 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 Q6ZUG5 572 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 TMTC3Q6ZXV5 915 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 CCDC82Q8N4S0 544 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 DNERQ8NFT8 737 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
HMGA1-206ENST00000478214 TAAR1Q96RJ0 339 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 SENP6Q9GZR1 1112 aaPredicted RBP18.06■□□□□ 0.48
HMGA1-206ENST00000478214 PDGFCQ9NRA1 345 aa18.06■□□□□ 0.48
HMGA1-206ENST00000478214 FRMPD3Q5JV73 1810 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 SYNRGQ9UMZ2 1314 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 LOC102724159A0A0B4J2E5 919 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 ADAMTS4O75173 837 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 DUSP11O75319 330 aaKnown RBP18.05■□□□□ 0.48
HMGA1-206ENST00000478214 EDNRBP24530 442 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
HMGA1-206ENST00000478214 TRAF1Q13077 416 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 PWP2Q15269 919 aaKnown RBP18.05■□□□□ 0.48
HMGA1-206ENST00000478214 RNF180Q86T96 592 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 VTA1Q9NP79 307 aa18.05■□□□□ 0.48
HMGA1-206ENST00000478214 NAP1L2Q9ULW6 460 aaPredicted RBP18.05■□□□□ 0.48
HMGA1-206ENST00000478214 CEP290O15078 2479 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 EVI5O60447 810 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
HMGA1-206ENST00000478214 HSD17B4P51659 736 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 GHRHRQ02643 423 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 TNFAIP2Q03169 654 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 PDE4DQ08499 809 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 APOBRQ0VD83 1088 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 RTN1Q16799 776 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 TMEM63BQ5T3F8 832 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 BRF1Q92994 677 aa18.04■□□□□ 0.48
HMGA1-206ENST00000478214 SEC63Q9UGP8 760 aaKnown RBP18.04■□□□□ 0.48
HMGA1-206ENST00000478214 MYADML2A6NDP7 307 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 GOLGA8AA7E2F4 631 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 H0YGN5 161 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 SMPD1P17405 629 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 PTGS1P23219 599 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 ATN1P54259 1190 aaPredicted RBP18.03■□□□□ 0.48
HMGA1-206ENST00000478214 LRRC26Q2I0M4 334 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 IQSEC1Q6DN90 963 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 NOL8Q76FK4 1167 aaKnown RBP18.03■□□□□ 0.48
HMGA1-206ENST00000478214 KLHDC9Q8NEP7 349 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 NSUN6Q8TEA1 469 aaKnown RBP18.03■□□□□ 0.48
HMGA1-206ENST00000478214 FERMT2Q96AC1 680 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 RMDN3Q96TC7 470 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 MPHOSPH6Q99547 160 aaKnown RBP18.03■□□□□ 0.48
HMGA1-206ENST00000478214 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 FAM217BQ9NTX9 383 aaPredicted RBP18.03■□□□□ 0.48
HMGA1-206ENST00000478214 RBM28Q9NW13 759 aaKnown RBP18.03■□□□□ 0.48
HMGA1-206ENST00000478214 NR2E3Q9Y5X4 410 aa18.03■□□□□ 0.48
HMGA1-206ENST00000478214 B4DLN1 442 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 CDC27P30260 824 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 MRPL12P52815 198 aaKnown RBP18.02■□□□□ 0.48
HMGA1-206ENST00000478214 GJA9P57773 515 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 RUFY3Q7L099 469 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 C7orf61Q8IZ16 206 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 FBXL16Q8N461 479 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 AGXT2Q9BYV1 514 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
HMGA1-206ENST00000478214 PHF24Q9UPV7 400 aa18.02■□□□□ 0.48
HMGA1-206ENST00000478214 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
HMGA1-206ENST00000478214 MYH6P13533 1939 aa18.02■□□□□ 0.47
HMGA1-206ENST00000478214 RBM47A0AV96 593 aaKnown RBP18.01■□□□□ 0.47
HMGA1-206ENST00000478214 GCOM1H8Y6P7 765 aaPredicted RBP18.01■□□□□ 0.47
HMGA1-206ENST00000478214 C6orf222P0C671 652 aaPredicted RBP18.01■□□□□ 0.47
HMGA1-206ENST00000478214 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms