RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 KRT32Q14532 448 aa26.41■■□□□ 1.82
TRAF4-211ENST00000478021 RNF180Q86T96 592 aa26.41■■□□□ 1.82
TRAF4-211ENST00000478021 PDGFCQ9NRA1 345 aa26.41■■□□□ 1.82
TRAF4-211ENST00000478021 ADAMTS4O75173 837 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 PLEKHA8P1O95397 391 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 KIF5BP33176 963 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 EXOSC10Q01780 885 aaKnown RBP26.4■■□□□ 1.82
TRAF4-211ENST00000478021 DHX32Q7L7V1 743 aaKnown RBP26.4■■□□□ 1.82
TRAF4-211ENST00000478021 RGS22Q8NE09 1264 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 MORC4Q8TE76 937 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 MAP3K14Q99558 947 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 PCDHA1Q9Y5I3 950 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 SNX14Q9Y5W7 946 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 SLC12A7Q9Y666 1083 aa26.4■■□□□ 1.82
TRAF4-211ENST00000478021 MYADML2A6NDP7 307 aa26.39■■□□□ 1.82
TRAF4-211ENST00000478021 DUSP11O75319 330 aaKnown RBP26.39■■□□□ 1.82
TRAF4-211ENST00000478021 CPA1P15085 419 aa26.39■■□□□ 1.82
TRAF4-211ENST00000478021 NOL8Q76FK4 1167 aaKnown RBP26.39■■□□□ 1.82
TRAF4-211ENST00000478021 MCF2L2Q86YR7 1114 aa26.39■■□□□ 1.82
TRAF4-211ENST00000478021 SYTL5Q8TDW5 730 aaPredicted RBP26.39■■□□□ 1.82
TRAF4-211ENST00000478021 KCNB2Q92953 911 aa26.39■■□□□ 1.82
TRAF4-211ENST00000478021 COL20A1Q9P218 1284 aa26.39■■□□□ 1.82
TRAF4-211ENST00000478021 ZMYND8Q9ULU4 1186 aaPredicted RBP26.39■■□□□ 1.82
TRAF4-211ENST00000478021 OPLAHO14841 1288 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 CFBP00751 764 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 PTGS1P23219 599 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 TNFAIP2Q03169 654 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 TAPT1Q6NXT6 567 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 MICU3Q86XE3 530 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 CMTR1Q8N1G2 835 aaKnown RBP26.38■■□□□ 1.81
TRAF4-211ENST00000478021 JAKMIP1Q96N16 626 aaKnown RBP26.38■■□□□ 1.81
TRAF4-211ENST00000478021 TAAR1Q96RJ0 339 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 VTA1Q9NP79 307 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 PCDH10Q9P2E7 1040 aa26.38■■□□□ 1.81
TRAF4-211ENST00000478021 PNMA6FA0A0J9YX94 578 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 C6orf222P0C671 652 aaPredicted RBP26.37■■□□□ 1.81
TRAF4-211ENST00000478021 CALM1P0DP23 149 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 CALM2P0DP24 149 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 CALM3P0DP25 149 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 PDE4DQ08499 809 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 TMEM63BQ5T3F8 832 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 SGMS1Q86VZ5 419 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 DNERQ8NFT8 737 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 SPZ1Q9BXG8 430 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 PHF24Q9UPV7 400 aa26.37■■□□□ 1.81
TRAF4-211ENST00000478021 SYN1P17600 705 aa26.36■■□□□ 1.81
TRAF4-211ENST00000478021 SRBD1Q8N5C6 995 aaKnown RBP26.36■■□□□ 1.81
TRAF4-211ENST00000478021 LOC102724159A0A0B4J2E5 919 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 SMPD1P17405 629 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 PWP2Q15269 919 aaKnown RBP26.35■■□□□ 1.81
TRAF4-211ENST00000478021 APOA5Q6Q788 366 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 SLC39A5Q6ZMH5 540 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 SYNE3Q6ZMZ3 975 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 KLHDC9Q8NEP7 349 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 RRP36Q96EU6 259 aaKnown RBP26.35■■□□□ 1.81
TRAF4-211ENST00000478021 MPHOSPH6Q99547 160 aaKnown RBP26.35■■□□□ 1.81
TRAF4-211ENST00000478021 UPF3AQ9H1J1 476 aaKnown RBP26.35■■□□□ 1.81
TRAF4-211ENST00000478021 SPC25Q9HBM1 224 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 BRPF3Q9ULD4 1205 aa26.35■■□□□ 1.81
TRAF4-211ENST00000478021 A0A1W2PQ45 241 aaPredicted RBP26.34■■□□□ 1.81
TRAF4-211ENST00000478021 A0A1W2PQY0 241 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 HMGB1P09429 215 aaKnown RBP26.34■■□□□ 1.81
TRAF4-211ENST00000478021 EDNRBP24530 442 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 GNAQP50148 359 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 GJA9P57773 515 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 RTP1P59025 263 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 KCNA10Q16322 511 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 IQSEC1Q6DN90 963 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 CHRDL2Q6WN34 429 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 TLK2Q86UE8 772 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 CCDC82Q8N4S0 544 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 FANCBQ8NB91 859 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 MAF1Q9H063 256 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 GNEQ9Y223 722 aaKnown RBP26.34■■□□□ 1.81
TRAF4-211ENST00000478021 ATP11BQ9Y2G3 1177 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 CEP290O15078 2479 aa26.34■■□□□ 1.81
TRAF4-211ENST00000478021 HOXA13P31271 388 aaPredicted RBP26.33■■□□□ 1.81
TRAF4-211ENST00000478021 HSD17B4P51659 736 aa26.33■■□□□ 1.81
TRAF4-211ENST00000478021 BEX3Q00994 111 aa26.33■■□□□ 1.81
TRAF4-211ENST00000478021 RMDN3Q96TC7 470 aa26.33■■□□□ 1.81
TRAF4-211ENST00000478021 LZTS2Q9BRK4 669 aa26.33■■□□□ 1.81
TRAF4-211ENST00000478021 TSEN34Q9BSV6 310 aaKnown RBP26.33■■□□□ 1.81
TRAF4-211ENST00000478021 COLQQ9Y215 455 aaPredicted RBP26.33■■□□□ 1.81
TRAF4-211ENST00000478021 EIF2AK2P19525 551 aaKnown RBP26.32■■□□□ 1.8
TRAF4-211ENST00000478021 CST5P28325 142 aaPredicted RBP26.32■■□□□ 1.8
TRAF4-211ENST00000478021 ACLYP53396 1101 aa26.32■■□□□ 1.8
TRAF4-211ENST00000478021 FGD1P98174 961 aa26.32■■□□□ 1.8
TRAF4-211ENST00000478021 TRAF1Q13077 416 aa26.32■■□□□ 1.8
TRAF4-211ENST00000478021 GNASQ5JWF2 1037 aa26.32■■□□□ 1.8
TRAF4-211ENST00000478021 CCSAPQ6IQ19 270 aaPredicted RBP26.32■■□□□ 1.8
TRAF4-211ENST00000478021 BLOC1S2Q6QNY1 142 aa26.32■■□□□ 1.8
TRAF4-211ENST00000478021 NSUN6Q8TEA1 469 aaKnown RBP26.32■■□□□ 1.8
TRAF4-211ENST00000478021 WDR11Q9BZH6 1224 aa26.32■■□□□ 1.8
TRAF4-211ENST00000478021 SEC63Q9UGP8 760 aaKnown RBP26.32■■□□□ 1.8
TRAF4-211ENST00000478021 NAP1L2Q9ULW6 460 aaPredicted RBP26.32■■□□□ 1.8
TRAF4-211ENST00000478021 KLF18A0A0U1RQI7 1052 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 hCG_1642624A0A1W2PR95 340 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 B4DLN1 442 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 CTAGE5O15320 804 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 DYNC1LI2O43237 492 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms