RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 PP2D1A8MPX8 630 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
PTPRF-212ENST00000477970 MCTP2Q6DN12 878 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 FEZ1Q99689 392 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 RAB34Q9BZG1 259 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 CPVLQ9H3G5 476 aa13.72□□□□□ -0.21
PTPRF-212ENST00000477970 EDIL3O43854 480 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 GYPCP04921 128 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 TTI2Q6NXR4 508 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 ADGRF4Q8IZF3 695 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 CALML4Q96GE6 196 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 SERPINA10Q9UK55 444 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 ATRNL1Q5VV63 1379 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 PVALEFA0A1B0GWK0 134 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 ZBTB5O15062 677 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 CCDC175P0C221 793 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 CDC25AP30304 524 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 GOLGA8FQ08AF8 430 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 GOLGA8DPQ0D2H9 430 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 TMEM266Q2M3C6 531 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 DACT2Q5SW24 774 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
PTPRF-212ENST00000477970 FRMPD2Q68DX3 1309 aaPredicted RBP13.71□□□□□ -0.22
PTPRF-212ENST00000477970 CALCRLQ16602 461 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 TOGARAM2Q6ZUX3 1019 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 TMTC1Q8IUR5 882 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 LRRC47Q8N1G4 583 aaKnown RBP13.7□□□□□ -0.22
PTPRF-212ENST00000477970 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
PTPRF-212ENST00000477970 LGALS16A8MUM7 142 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 N4BP3O15049 544 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 CCNE1P24864 410 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 DOK7Q18PE1 504 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 ZNF507Q8TCN5 953 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 CUL5Q93034 780 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 IQCDQ96DY2 449 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 TMEM119Q4V9L6 283 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 HYIQ5T013 277 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 ZNF397Q8NF99 534 aaPredicted RBP13.7□□□□□ -0.22
PTPRF-212ENST00000477970 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 ADGRG1Q9Y653 693 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 ABCB11O95342 1321 aa13.7□□□□□ -0.22
PTPRF-212ENST00000477970 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
PTPRF-212ENST00000477970 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 DNAJC18Q9H819 358 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 PI4KBQ9UBF8 816 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 WDR90Q96KV7 1748 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
PTPRF-212ENST00000477970 GRB10Q13322 594 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 TUBB2AQ13885 445 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 SEPT2Q15019 361 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 P2RX5Q93086 422 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 TUBB2BQ9BVA1 445 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 F8W031 263 aaPredicted RBP13.69□□□□□ -0.22
PTPRF-212ENST00000477970 G3V3G9 751 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 YY1P25490 414 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 CASP14P31944 242 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 TECP42680 631 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 GMCL1P1Q8NEA9 526 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 MBOAT7Q96N66 472 aa13.69□□□□□ -0.22
PTPRF-212ENST00000477970 SRCAPQ6ZRS2 3230 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 FANCGO15287 622 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 SCNN1DP51172 638 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 PSMD2Q13200 908 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 UNC13DQ70J99 1090 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 COA7Q96BR5 231 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 PNMA5Q96PV4 448 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
PTPRF-212ENST00000477970 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 LRWD1Q9UFC0 647 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 ENTPD3O75355 529 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 CYP3A7P24462 503 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 DNM2P50570 870 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 FXR1P51114 621 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPRF-212ENST00000477970 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 CYP26C1Q6V0L0 522 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 RAD9BQ6WBX8 426 aa13.68□□□□□ -0.22
PTPRF-212ENST00000477970 SV2BQ7L1I2 683 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms